Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 AC211429.1-201ENST00000415277 523 ntBASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 KRT8P26-201ENST00000534154 1276 ntBASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 DUX4L17-201ENST00000557360 1267 ntBASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 AC148477.5-201ENST00000625164 1645 ntBASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 AC246785.2-201ENST00000432512 513 ntBASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 NUS1P1-201ENST00000446295 882 ntBASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 AP002490.2-201ENST00000524791 560 ntBASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 HYMAI-201ENST00000635591 3347 ntBASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BBS1Q8NFJ9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 LINC00554-201ENST00000564841 3011 ntBASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BBS1Q8NFJ9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms