Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC38A9Q8NBW4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC38A9Q8NBW4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC38A9Q8NBW4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.92■□□□□ 0.14
SLC38A9Q8NBW4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC38A9Q8NBW4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC38A9Q8NBW4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC38A9Q8NBW4 AKAP8P1-201ENST00000434743 1349 ntBASIC15.92■□□□□ 0.14
SLC38A9Q8NBW4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 LINC02012-201ENST00000608206 1725 ntBASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 PCDHB18P-201ENST00000524813 2368 ntBASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 RNU1-129P-201ENST00000384064 167 ntBASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 SPCS2P4-201ENST00000436160 681 ntBASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 RN7SL589P-201ENST00000481268 310 ntBASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 AC069335.1-201ENST00000489972 472 ntBASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 AC109635.5-201ENST00000533593 962 ntBASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 U1.21-201ENST00000580816 167 ntBASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 KRT8P49-201ENST00000604166 1432 ntBASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SLC38A9Q8NBW4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 AC087641.1-201ENST00000557561 1021 ntBASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 LINC01225-203ENST00000563550 1244 ntBASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.9■□□□□ 0.14
SLC38A9Q8NBW4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SLC38A9Q8NBW4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC38A9Q8NBW4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A9Q8NBW4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A9Q8NBW4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A9Q8NBW4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.89■□□□□ 0.13
SLC38A9Q8NBW4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC38A9Q8NBW4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SLC38A9Q8NBW4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms