Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 MED15P5-201ENST00000423150 992 ntBASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 KRT18P3-201ENST00000451602 1288 ntBASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 AC018845.2-201ENST00000568326 409 ntBASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 FLJ38576-201ENST00000623820 2459 ntBASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ZIC4Q8N9L1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
ZIC4Q8N9L1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ZIC4Q8N9L1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ZIC4Q8N9L1 SNX33P1-201ENST00000592116 1762 ntBASIC14.96□□□□□ -0.02
ZIC4Q8N9L1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 AL603756.1-201ENST00000606511 2163 ntBASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 AC011676.5-201ENST00000624864 2660 ntBASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 AL513480.1-201ENST00000451731 511 ntBASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 MIR4515-201ENST00000584082 81 ntBASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ZIC4Q8N9L1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 MIR940-201ENST00000401276 94 ntBASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 RNA5SP416-201ENST00000516838 111 ntBASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 KRT18P58-201ENST00000527480 1120 ntBASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 CYP2A7P1-201ENST00000595391 815 ntBASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 AC004877.2-201ENST00000623941 599 ntBASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC4Q8N9L1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms