Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
XRN1Q8IZH2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC23.11■■□□□ 1.29
XRN1Q8IZH2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
XRN1Q8IZH2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
XRN1Q8IZH2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
XRN1Q8IZH2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
XRN1Q8IZH2 FAM86MP-201ENST00000340703 885 ntBASIC23.11■■□□□ 1.29
XRN1Q8IZH2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
XRN1Q8IZH2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
XRN1Q8IZH2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC23.11■■□□□ 1.29
XRN1Q8IZH2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC23.11■■□□□ 1.29
XRN1Q8IZH2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 AC234783.1-201ENST00000441761 496 ntBASIC23.1■■□□□ 1.29
XRN1Q8IZH2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 AC123567.1-201ENST00000548294 1261 ntBASIC23.1■■□□□ 1.29
XRN1Q8IZH2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 WFDC1-204ENST00000613603 549 ntBASIC23.1■■□□□ 1.29
XRN1Q8IZH2 AL109936.8-201ENST00000641772 604 ntBASIC23.1■■□□□ 1.29
XRN1Q8IZH2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 AL671710.1-201ENST00000610245 2349 ntBASIC23.1■■□□□ 1.29
XRN1Q8IZH2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
XRN1Q8IZH2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 AC007389.4-201ENST00000454674 793 ntBASIC23.09■■□□□ 1.29
XRN1Q8IZH2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 AL391069.4-201ENST00000609583 481 ntBASIC23.09■■□□□ 1.29
XRN1Q8IZH2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 COX11-210ENST00000639671 696 ntBASIC23.09■■□□□ 1.29
XRN1Q8IZH2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
XRN1Q8IZH2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 SPDYE17-201ENST00000412399 783 ntBASIC23.08■■□□□ 1.29
XRN1Q8IZH2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
XRN1Q8IZH2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
XRN1Q8IZH2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
XRN1Q8IZH2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC23.08■■□□□ 1.28
XRN1Q8IZH2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC23.08■■□□□ 1.28
XRN1Q8IZH2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
XRN1Q8IZH2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 TUBB8P12-201ENST00000308911 1335 ntBASIC23.07■■□□□ 1.28
XRN1Q8IZH2 TUBB7P-202ENST00000428444 1305 ntBASIC23.07■■□□□ 1.28
XRN1Q8IZH2 TUBB8P7-204ENST00000567960 1332 ntBASIC23.07■■□□□ 1.28
XRN1Q8IZH2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 AP005482.1-201ENST00000563722 1273 ntBASIC23.07■■□□□ 1.28
XRN1Q8IZH2 RRP7BP-205ENST00000566851 833 ntBASIC23.07■■□□□ 1.28
XRN1Q8IZH2 AC093726.1-201ENST00000608064 963 ntBASIC23.07■■□□□ 1.28
XRN1Q8IZH2 AL033527.5-202ENST00000641632 1098 ntBASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms