Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHPFQ8IZ52 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHPFQ8IZ52 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHPFQ8IZ52 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 MIR770-201ENST00000390219 98 ntBASIC17.23■□□□□ 0.35
CHPFQ8IZ52 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 SPDYE11-202ENST00000450699 704 ntBASIC17.23■□□□□ 0.35
CHPFQ8IZ52 HLA-J-203ENST00000494367 1087 ntBASIC17.23■□□□□ 0.35
CHPFQ8IZ52 SPDYE9P-201ENST00000570642 692 ntBASIC17.23■□□□□ 0.35
CHPFQ8IZ52 AC005412.3-201ENST00000580309 715 ntBASIC17.23■□□□□ 0.35
CHPFQ8IZ52 AC099522.2-201ENST00000607001 744 ntBASIC17.23■□□□□ 0.35
CHPFQ8IZ52 SPDYE10P-202ENST00000612005 668 ntBASIC17.23■□□□□ 0.35
CHPFQ8IZ52 SPDYE8P-202ENST00000612377 668 ntBASIC17.23■□□□□ 0.35
CHPFQ8IZ52 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHPFQ8IZ52 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 PRORSD1P-202ENST00000563365 2154 ntBASIC17.22■□□□□ 0.35
CHPFQ8IZ52 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 AC009053.2-201ENST00000563701 2365 ntBASIC17.22■□□□□ 0.35
CHPFQ8IZ52 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 LINC00628-201ENST00000628516 1289 ntBASIC17.22■□□□□ 0.35
CHPFQ8IZ52 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.22■□□□□ 0.35
CHPFQ8IZ52 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 AC005237.2-201ENST00000434368 219 ntBASIC17.21■□□□□ 0.35
CHPFQ8IZ52 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 AC011467.4-201ENST00000594891 528 ntBASIC17.21■□□□□ 0.35
CHPFQ8IZ52 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHPFQ8IZ52 AC012569.1-201ENST00000591191 1524 ntBASIC17.21■□□□□ 0.34
CHPFQ8IZ52 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CHPFQ8IZ52 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CHPFQ8IZ52 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CHPFQ8IZ52 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.21■□□□□ 0.34
CHPFQ8IZ52 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CHPFQ8IZ52 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CHPFQ8IZ52 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms