Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 AC013467.2-201ENST00000605472 835 ntBASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 AC066615.1-201ENST00000640911 628 ntBASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 AC148477.5-201ENST00000625164 1645 ntBASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 KRT8P49-201ENST00000604166 1432 ntBASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC170Q8IYT3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 CHCHD2P8-201ENST00000429873 447 ntBASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC170Q8IYT3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 NTF6B-201ENST00000591913 560 ntBASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 AP000867.4-201ENST00000641616 219 ntBASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms