Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.88■□□□□ 0.29
APLFQ8IW19 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
APLFQ8IW19 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
APLFQ8IW19 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 AC096582.2-201ENST00000510860 516 ntBASIC16.88■□□□□ 0.29
APLFQ8IW19 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.88■□□□□ 0.29
APLFQ8IW19 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.88■□□□□ 0.29
APLFQ8IW19 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.88■□□□□ 0.29
APLFQ8IW19 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
APLFQ8IW19 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.88■□□□□ 0.29
APLFQ8IW19 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
APLFQ8IW19 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.88■□□□□ 0.29
APLFQ8IW19 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.87■□□□□ 0.29
APLFQ8IW19 AC092068.3-201ENST00000587894 2016 ntBASIC16.87■□□□□ 0.29
APLFQ8IW19 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
APLFQ8IW19 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
APLFQ8IW19 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.87■□□□□ 0.29
APLFQ8IW19 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
APLFQ8IW19 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 RNPS1P1-201ENST00000507437 918 ntBASIC16.87■□□□□ 0.29
APLFQ8IW19 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.87■□□□□ 0.29
APLFQ8IW19 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.87■□□□□ 0.29
APLFQ8IW19 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 AC008608.2-201ENST00000606089 416 ntBASIC16.87■□□□□ 0.29
APLFQ8IW19 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 AC133963.1-201ENST00000504166 1679 ntBASIC16.87■□□□□ 0.29
APLFQ8IW19 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
APLFQ8IW19 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
APLFQ8IW19 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
APLFQ8IW19 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
APLFQ8IW19 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 C8orf49-201ENST00000525043 1968 ntBASIC16.86■□□□□ 0.29
APLFQ8IW19 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.86■□□□□ 0.29
APLFQ8IW19 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 MIR149-201ENST00000384879 89 ntBASIC16.86■□□□□ 0.29
APLFQ8IW19 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.86■□□□□ 0.29
APLFQ8IW19 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.86■□□□□ 0.29
APLFQ8IW19 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.86■□□□□ 0.29
APLFQ8IW19 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
APLFQ8IW19 KRT18P58-201ENST00000527480 1120 ntBASIC16.86■□□□□ 0.29
APLFQ8IW19 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.86■□□□□ 0.29
APLFQ8IW19 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms