Protein–RNA interactions for Protein: Q8IVN8

SBSPON, Somatomedin-B and thrombospondin type-1 domain-containing protein, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPONQ8IVN8 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SBSPONQ8IVN8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 BCRP1-201ENST00000444246 691 ntBASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 AC002558.1-201ENST00000488906 803 ntBASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 AC025678.2-201ENST00000562061 970 ntBASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 AL096865.1-201ENST00000606796 927 ntBASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 REXO1L3P-201ENST00000622202 1288 ntBASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SBSPONQ8IVN8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 MYCLP1-201ENST00000372451 1075 ntBASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 AL513480.1-201ENST00000451731 511 ntBASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 HLA-J-203ENST00000494367 1087 ntBASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC12.61□□□□□ -0.39
SBSPONQ8IVN8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms