Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRC28Q86X40 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRC28Q86X40 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.14■□□□□ 0.01
LRRC28Q86X40 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRC28Q86X40 AC011840.4-201ENST00000578471 627 ntBASIC15.14■□□□□ 0.01
LRRC28Q86X40 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRC28Q86X40 CLEC4GP1-201ENST00000596555 870 ntBASIC15.14■□□□□ 0.01
LRRC28Q86X40 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRC28Q86X40 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRRC28Q86X40 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.14■□□□□ 0.01
LRRC28Q86X40 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRC28Q86X40 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRC28Q86X40 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRC28Q86X40 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRC28Q86X40 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRC28Q86X40 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRRC28Q86X40 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.14■□□□□ 0.01
LRRC28Q86X40 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRRC28Q86X40 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 NUS1P1-201ENST00000446295 882 ntBASIC15.13■□□□□ 0.01
LRRC28Q86X40 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 VENTXP7-201ENST00000475503 772 ntBASIC15.13■□□□□ 0.01
LRRC28Q86X40 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 AP000867.3-201ENST00000524675 377 ntBASIC15.13■□□□□ 0.01
LRRC28Q86X40 AC012615.1-201ENST00000565797 1299 ntBASIC15.13■□□□□ 0.01
LRRC28Q86X40 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 AC009154.2-201ENST00000621177 724 ntBASIC15.13■□□□□ 0.01
LRRC28Q86X40 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.13■□□□□ 0.01
LRRC28Q86X40 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRRC28Q86X40 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRC28Q86X40 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRC28Q86X40 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRC28Q86X40 AC233702.3-201ENST00000578656 1387 ntBASIC15.12■□□□□ 0.01
LRRC28Q86X40 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LRRC28Q86X40 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRC28Q86X40 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRC28Q86X40 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 AC246785.2-201ENST00000432512 513 ntBASIC15.12■□□□□ 0.01
LRRC28Q86X40 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRC28Q86X40 AC068472.1-201ENST00000474589 881 ntBASIC15.12■□□□□ 0.01
LRRC28Q86X40 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.12■□□□□ 0.01
LRRC28Q86X40 KRT126P-201ENST00000549467 1181 ntBASIC15.12■□□□□ 0.01
LRRC28Q86X40 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.12■□□□□ 0.01
LRRC28Q86X40 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 Z69720.1-201ENST00000601483 472 ntBASIC15.12■□□□□ 0.01
LRRC28Q86X40 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.12■□□□□ 0.01
LRRC28Q86X40 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms