Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 AC034105.1-201ENST00000563488 319 ntBASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 AC106730.1-201ENST00000566722 1090 ntBASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 OR7E47P-204ENST00000575924 449 ntBASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LYSMD3Q7Z3D4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 ZNF259P1-201ENST00000407656 1365 ntBASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 AC005915.1-201ENST00000624912 2018 ntBASIC17.03■□□□□ 0.32
LYSMD3Q7Z3D4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 AL162727.3-201ENST00000635661 2787 ntBASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 GPALPP1-207ENST00000611650 899 ntBASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 AC010654.1-201ENST00000615722 808 ntBASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 AC023511.2-201ENST00000618803 211 ntBASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LYSMD3Q7Z3D4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LYSMD3Q7Z3D4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LYSMD3Q7Z3D4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LYSMD3Q7Z3D4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.02■□□□□ 0.31
LYSMD3Q7Z3D4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LYSMD3Q7Z3D4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LYSMD3Q7Z3D4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LYSMD3Q7Z3D4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD3Q7Z3D4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms