Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TTC39BQ5VTQ0 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 EGFEM1P-202ENST00000431685 1563 ntBASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 MIR4751-201ENST00000578027 74 ntBASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 CROCCP1-201ENST00000426910 5675 ntBASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.66■□□□□ 0.42
TTC39BQ5VTQ0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 AC093525.9-201ENST00000624961 1746 ntBASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 MED15P5-201ENST00000423150 992 ntBASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 PAWRP1-201ENST00000451083 565 ntBASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TTC39BQ5VTQ0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TTC39BQ5VTQ0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.64■□□□□ 0.41
TTC39BQ5VTQ0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms