Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.58■□□□□ 0.4
LRRC38Q5VT99 AC006504.4-201ENST00000592118 1568 ntBASIC17.57■□□□□ 0.4
LRRC38Q5VT99 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.57■□□□□ 0.4
LRRC38Q5VT99 ELK2BP-201ENST00000415014 1224 ntBASIC17.57■□□□□ 0.4
LRRC38Q5VT99 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 PKD1P1-201ENST00000458669 6805 ntBASIC17.57■□□□□ 0.4
LRRC38Q5VT99 PI4KAP1-204ENST00000612579 1703 ntBASIC17.57■□□□□ 0.4
LRRC38Q5VT99 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC38Q5VT99 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 KRT18P27-201ENST00000427733 1299 ntBASIC17.56■□□□□ 0.4
LRRC38Q5VT99 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC38Q5VT99 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 ALOX12P2-203ENST00000570921 1945 ntBASIC17.55■□□□□ 0.4
LRRC38Q5VT99 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.55■□□□□ 0.4
LRRC38Q5VT99 SLC25A6P2-201ENST00000497974 877 ntBASIC17.55■□□□□ 0.4
LRRC38Q5VT99 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms