Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 RBPMS2P1-201ENST00000437762 623 ntBASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 BCRP1-201ENST00000444246 691 ntBASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 IGHV3-62-201ENST00000520057 340 ntBASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 MIR4492-201ENST00000581627 80 ntBASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 AC015911.4-201ENST00000588022 1070 ntBASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 AC011467.4-201ENST00000594891 528 ntBASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 AC092053.1-201ENST00000605787 1936 ntBASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNFT1Q5M7Z0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 AL512356.2-201ENST00000546955 174 ntBASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 CYP2A7P1-201ENST00000595391 815 ntBASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 AC092364.2-202ENST00000597012 1073 ntBASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 AP001059.3-201ENST00000619053 235 ntBASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNFT1Q5M7Z0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 LINC02012-201ENST00000608206 1725 ntBASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 AC016027.1-202ENST00000607927 1699 ntBASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 AL021920.2-201ENST00000624828 1351 ntBASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 PMS2P4-201ENST00000412466 1052 ntBASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 KRT8P23-201ENST00000560090 1207 ntBASIC15.17■□□□□ 0.02
RNFT1Q5M7Z0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms