Protein–RNA interactions for Protein: Q3SY56

SP6, Transcription factor Sp6, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP6Q3SY56 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.1□□□□□ -0.15
SP6Q3SY56 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SP6Q3SY56 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.1□□□□□ -0.15
SP6Q3SY56 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.1□□□□□ -0.15
SP6Q3SY56 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SP6Q3SY56 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.1□□□□□ -0.15
SP6Q3SY56 AL049757.1-201ENST00000616842 1596 ntBASIC14.1□□□□□ -0.15
SP6Q3SY56 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SP6Q3SY56 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 KRT8P10-201ENST00000450021 1447 ntBASIC14.1□□□□□ -0.15
SP6Q3SY56 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.1□□□□□ -0.15
SP6Q3SY56 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.1□□□□□ -0.15
SP6Q3SY56 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SP6Q3SY56 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.1□□□□□ -0.15
SP6Q3SY56 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.1□□□□□ -0.15
SP6Q3SY56 SLC25A3P1-201ENST00000443844 931 ntBASIC14.1□□□□□ -0.15
SP6Q3SY56 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.1□□□□□ -0.15
SP6Q3SY56 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SP6Q3SY56 AC111152.3-201ENST00000569699 673 ntBASIC14.1□□□□□ -0.15
SP6Q3SY56 AC005332.3-201ENST00000589904 676 ntBASIC14.1□□□□□ -0.15
SP6Q3SY56 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.1□□□□□ -0.15
SP6Q3SY56 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.1□□□□□ -0.15
SP6Q3SY56 AC005052.1-201ENST00000625181 2492 ntBASIC14.1□□□□□ -0.15
SP6Q3SY56 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SP6Q3SY56 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.1□□□□□ -0.15
SP6Q3SY56 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.1□□□□□ -0.15
SP6Q3SY56 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.1□□□□□ -0.15
SP6Q3SY56 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 KRT18P22-201ENST00000402024 1347 ntBASIC14.1□□□□□ -0.15
SP6Q3SY56 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.1□□□□□ -0.15
SP6Q3SY56 AL365203.3-201ENST00000609742 2057 ntBASIC14.1□□□□□ -0.15
SP6Q3SY56 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.1□□□□□ -0.15
SP6Q3SY56 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SP6Q3SY56 DBET-201ENST00000630918 3363 ntBASIC14.09□□□□□ -0.15
SP6Q3SY56 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SP6Q3SY56 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.09□□□□□ -0.15
SP6Q3SY56 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.09□□□□□ -0.15
SP6Q3SY56 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SP6Q3SY56 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SP6Q3SY56 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SP6Q3SY56 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.09□□□□□ -0.15
SP6Q3SY56 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.09□□□□□ -0.15
SP6Q3SY56 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 MIR662-201ENST00000384847 95 ntBASIC14.09□□□□□ -0.15
SP6Q3SY56 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SP6Q3SY56 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.09□□□□□ -0.15
SP6Q3SY56 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.09□□□□□ -0.15
SP6Q3SY56 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.09□□□□□ -0.15
SP6Q3SY56 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SP6Q3SY56 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SP6Q3SY56 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.09□□□□□ -0.15
SP6Q3SY56 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
SP6Q3SY56 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.09□□□□□ -0.15
SP6Q3SY56 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.09□□□□□ -0.15
SP6Q3SY56 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SP6Q3SY56 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SP6Q3SY56 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.09□□□□□ -0.15
SP6Q3SY56 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SP6Q3SY56 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.09□□□□□ -0.15
SP6Q3SY56 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
SP6Q3SY56 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms