Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 AC005521.1-201ENST00000393351 872 ntBASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 LINC01238-205ENST00000567549 1107 ntBASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 FAM87A-204ENST00000613235 858 ntBASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 AC126177.1-201ENST00000547829 2218 ntBASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 GPR89P-201ENST00000407924 1495 ntBASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ANKRD55Q3KP44 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 TERF1P1-201ENST00000311003 1181 ntBASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 TMPOP1-202ENST00000424642 1267 ntBASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 KRT18P21-201ENST00000515767 1272 ntBASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 AL136038.4-201ENST00000603606 1261 ntBASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 AC140113.3-201ENST00000605663 199 ntBASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ANKRD55Q3KP44 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ANKRD55Q3KP44 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms