Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
PRICKLE4Q2TBC4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.75■□□□□ 0.11
PRICKLE4Q2TBC4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRICKLE4Q2TBC4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRICKLE4Q2TBC4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRICKLE4Q2TBC4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
PRICKLE4Q2TBC4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRICKLE4Q2TBC4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRICKLE4Q2TBC4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRICKLE4Q2TBC4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 IGLL3P-201ENST00000412472 434 ntBASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 AC120114.3-201ENST00000611923 658 ntBASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 ACTL9-202ENST00000612068 1252 ntBASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PRICKLE4Q2TBC4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 SLC25A1P1-201ENST00000528351 927 ntBASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 AL139011.1-202ENST00000642063 584 ntBASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE4Q2TBC4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE4Q2TBC4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRICKLE4Q2TBC4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE4Q2TBC4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE4Q2TBC4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.72■□□□□ 0.11
PRICKLE4Q2TBC4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE4Q2TBC4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.72■□□□□ 0.11
PRICKLE4Q2TBC4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRICKLE4Q2TBC4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms