Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH17Q12864 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 PTCHD3P3-201ENST00000403073 906 ntBASIC17.12■□□□□ 0.33
CDH17Q12864 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH17Q12864 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH17Q12864 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.12■□□□□ 0.33
CDH17Q12864 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
CDH17Q12864 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDH17Q12864 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 TOP3BP1-201ENST00000420768 1380 ntBASIC17.12■□□□□ 0.33
CDH17Q12864 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH17Q12864 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH17Q12864 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH17Q12864 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDH17Q12864 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDH17Q12864 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH17Q12864 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH17Q12864 PI4KAP1-204ENST00000612579 1703 ntBASIC17.11■□□□□ 0.33
CDH17Q12864 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH17Q12864 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH17Q12864 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH17Q12864 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CDH17Q12864 AC013467.2-201ENST00000605472 835 ntBASIC17.11■□□□□ 0.33
CDH17Q12864 AL805961.1-202ENST00000641562 540 ntBASIC17.11■□□□□ 0.33
CDH17Q12864 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH17Q12864 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH17Q12864 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 UBALD1-205ENST00000590891 2641 ntBASIC17.11■□□□□ 0.33
CDH17Q12864 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CDH17Q12864 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CDH17Q12864 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDH17Q12864 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDH17Q12864 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH17Q12864 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH17Q12864 AC006504.4-201ENST00000592118 1568 ntBASIC17.11■□□□□ 0.33
CDH17Q12864 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH17Q12864 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH17Q12864 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDH17Q12864 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH17Q12864 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
CDH17Q12864 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 ELK2BP-201ENST00000415014 1224 ntBASIC17.1■□□□□ 0.33
CDH17Q12864 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH17Q12864 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH17Q12864 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH17Q12864 AC087163.2-201ENST00000457299 853 ntBASIC17.1■□□□□ 0.33
CDH17Q12864 HLA-J-202ENST00000469281 1241 ntBASIC17.1■□□□□ 0.33
CDH17Q12864 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 AC073648.2-201ENST00000510116 352 ntBASIC17.1■□□□□ 0.33
CDH17Q12864 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH17Q12864 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH17Q12864 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH17Q12864 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH17Q12864 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH17Q12864 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH17Q12864 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms