Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC092850.2-201ENST00000623821 2697 ntBASIC12.04□□□□□ -0.48
RPL39P62891 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RPL39P62891 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.03□□□□□ -0.48
RPL39P62891 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.03□□□□□ -0.48
RPL39P62891 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.03□□□□□ -0.48
RPL39P62891 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.03□□□□□ -0.48
RPL39P62891 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.03□□□□□ -0.48
RPL39P62891 NAPSB-206ENST00000562112 1266 ntBASIC12.03□□□□□ -0.48
RPL39P62891 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.03□□□□□ -0.48
RPL39P62891 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.03□□□□□ -0.48
RPL39P62891 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.03□□□□□ -0.48
RPL39P62891 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.03□□□□□ -0.48
RPL39P62891 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
RPL39P62891 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.03□□□□□ -0.48
RPL39P62891 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 AL353692.3-201ENST00000407031 1396 ntBASIC12.03□□□□□ -0.48
RPL39P62891 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RPL39P62891 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RPL39P62891 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RPL39P62891 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RPL39P62891 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RPL39P62891 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.02□□□□□ -0.48
RPL39P62891 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.02□□□□□ -0.48
RPL39P62891 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
RPL39P62891 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
RPL39P62891 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RPL39P62891 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RPL39P62891 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
RPL39P62891 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RPL39P62891 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.02□□□□□ -0.49
RPL39P62891 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RPL39P62891 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.02□□□□□ -0.49
RPL39P62891 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 IGHGP-201ENST00000390555 1178 ntBASIC12.02□□□□□ -0.49
RPL39P62891 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.02□□□□□ -0.49
RPL39P62891 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.02□□□□□ -0.49
RPL39P62891 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.02□□□□□ -0.49
RPL39P62891 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.02□□□□□ -0.49
RPL39P62891 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.02□□□□□ -0.49
RPL39P62891 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.02□□□□□ -0.49
RPL39P62891 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.02□□□□□ -0.49
RPL39P62891 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.02□□□□□ -0.49
RPL39P62891 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.02□□□□□ -0.49
RPL39P62891 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RPL39P62891 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.02□□□□□ -0.49
RPL39P62891 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RPL39P62891 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.02□□□□□ -0.49
RPL39P62891 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RPL39P62891 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RPL39P62891 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.01□□□□□ -0.49
RPL39P62891 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
RPL39P62891 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
RPL39P62891 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms