Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB38P57729 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB38P57729 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB38P57729 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 SLC22A20-204ENST00000530038 1673 ntBASIC15.9■□□□□ 0.14
RAB38P57729 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB38P57729 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB38P57729 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RAB38P57729 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB38P57729 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.9■□□□□ 0.14
RAB38P57729 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 AC087641.1-201ENST00000557561 1021 ntBASIC15.9■□□□□ 0.14
RAB38P57729 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.9■□□□□ 0.14
RAB38P57729 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB38P57729 MIR4492-201ENST00000581627 80 ntBASIC15.9■□□□□ 0.14
RAB38P57729 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.9■□□□□ 0.14
RAB38P57729 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.9■□□□□ 0.14
RAB38P57729 AC023141.13-201ENST00000604991 943 ntBASIC15.9■□□□□ 0.14
RAB38P57729 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RAB38P57729 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB38P57729 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 AC006277.1-201ENST00000624348 1610 ntBASIC15.9■□□□□ 0.14
RAB38P57729 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB38P57729 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB38P57729 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RAB38P57729 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB38P57729 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.89■□□□□ 0.13
RAB38P57729 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RAB38P57729 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.89■□□□□ 0.13
RAB38P57729 AL391256.1-201ENST00000443260 1855 ntBASIC15.89■□□□□ 0.13
RAB38P57729 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAB38P57729 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 AC022211.2-201ENST00000585075 2527 ntBASIC15.89■□□□□ 0.13
RAB38P57729 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB38P57729 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RAB38P57729 MIR940-201ENST00000401276 94 ntBASIC15.89■□□□□ 0.13
RAB38P57729 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.89■□□□□ 0.13
RAB38P57729 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RAB38P57729 POLD2P1-201ENST00000511220 997 ntBASIC15.89■□□□□ 0.13
RAB38P57729 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB38P57729 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
RAB38P57729 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.89■□□□□ 0.13
RAB38P57729 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAB38P57729 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.89■□□□□ 0.13
RAB38P57729 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 MIR4515-201ENST00000584082 81 ntBASIC15.89■□□□□ 0.13
RAB38P57729 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RAB38P57729 AL671883.3-201ENST00000603274 991 ntBASIC15.89■□□□□ 0.13
RAB38P57729 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.89■□□□□ 0.13
RAB38P57729 AL645728.2-201ENST00000641974 660 ntBASIC15.89■□□□□ 0.13
RAB38P57729 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
RAB38P57729 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
RAB38P57729 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB38P57729 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB38P57729 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RAB38P57729 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 BCAR1-209ENST00000546196 1340 ntBASIC15.89■□□□□ 0.13
RAB38P57729 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.89■□□□□ 0.13
RAB38P57729 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RAB38P57729 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.89■□□□□ 0.13
RAB38P57729 AC012569.1-201ENST00000591191 1524 ntBASIC15.89■□□□□ 0.13
RAB38P57729 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB38P57729 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAB38P57729 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms