Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PER3P56645 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PER3P56645 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.76■□□□□ 0.11
PER3P56645 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.76■□□□□ 0.11
PER3P56645 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 KRT8P47-201ENST00000604727 1398 ntBASIC15.75■□□□□ 0.11
PER3P56645 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
PER3P56645 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.75■□□□□ 0.11
PER3P56645 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PER3P56645 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PER3P56645 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PER3P56645 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.75■□□□□ 0.11
PER3P56645 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 MIR770-201ENST00000390219 98 ntBASIC15.75■□□□□ 0.11
PER3P56645 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.75■□□□□ 0.11
PER3P56645 AC103564.2-201ENST00000432853 1299 ntBASIC15.75■□□□□ 0.11
PER3P56645 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.75■□□□□ 0.11
PER3P56645 AC122714.2-201ENST00000502787 707 ntBASIC15.75■□□□□ 0.11
PER3P56645 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.75■□□□□ 0.11
PER3P56645 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PER3P56645 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.75■□□□□ 0.11
PER3P56645 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.75■□□□□ 0.11
PER3P56645 AC073592.4-201ENST00000623827 446 ntBASIC15.75■□□□□ 0.11
PER3P56645 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PER3P56645 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.75■□□□□ 0.11
PER3P56645 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PER3P56645 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PER3P56645 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PER3P56645 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
PER3P56645 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PER3P56645 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PER3P56645 AC010460.3-201ENST00000511359 1579 ntBASIC15.75■□□□□ 0.11
PER3P56645 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PER3P56645 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.74■□□□□ 0.11
PER3P56645 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PER3P56645 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 AC093677.2-201ENST00000600169 1863 ntBASIC15.74■□□□□ 0.11
PER3P56645 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.74■□□□□ 0.11
PER3P56645 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 AC073621.1-201ENST00000392730 636 ntBASIC15.74■□□□□ 0.11
PER3P56645 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.74■□□□□ 0.11
PER3P56645 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.74■□□□□ 0.11
PER3P56645 ALG1L5P-201ENST00000482043 771 ntBASIC15.74■□□□□ 0.11
PER3P56645 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.74■□□□□ 0.11
PER3P56645 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.74■□□□□ 0.11
PER3P56645 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.74■□□□□ 0.11
PER3P56645 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PER3P56645 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 SIGLEC16-201ENST00000599858 1437 ntBASIC15.74■□□□□ 0.11
PER3P56645 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PER3P56645 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.74■□□□□ 0.11
PER3P56645 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PER3P56645 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.73■□□□□ 0.11
PER3P56645 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
PER3P56645 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.73■□□□□ 0.11
PER3P56645 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PER3P56645 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PER3P56645 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PER3P56645 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PER3P56645 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PER3P56645 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PER3P56645 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.73■□□□□ 0.11
PER3P56645 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PER3P56645 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.73■□□□□ 0.11
PER3P56645 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PER3P56645 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.73■□□□□ 0.11
PER3P56645 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms