Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH12P55289 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDH12P55289 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH12P55289 DRAXINP1-201ENST00000437611 948 ntBASIC15.84■□□□□ 0.13
CDH12P55289 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 TPSP2-201ENST00000561760 610 ntBASIC15.84■□□□□ 0.13
CDH12P55289 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH12P55289 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDH12P55289 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH12P55289 IER3-202ENST00000376377 1350 ntBASIC15.84■□□□□ 0.13
CDH12P55289 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CDH12P55289 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 HLA-A-202ENST00000376806 1854 ntBASIC15.84■□□□□ 0.13
CDH12P55289 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 GPR89P-201ENST00000407924 1495 ntBASIC15.84■□□□□ 0.13
CDH12P55289 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH12P55289 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH12P55289 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH12P55289 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CDH12P55289 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH12P55289 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
CDH12P55289 AC009336.1-201ENST00000608941 1553 ntBASIC15.83■□□□□ 0.13
CDH12P55289 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDH12P55289 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH12P55289 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.83■□□□□ 0.13
CDH12P55289 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH12P55289 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH12P55289 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH12P55289 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDH12P55289 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CDH12P55289 AC132938.5-201ENST00000624980 1813 ntBASIC15.83■□□□□ 0.12
CDH12P55289 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH12P55289 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 TOB2P1-201ENST00000469761 992 ntBASIC15.83■□□□□ 0.12
CDH12P55289 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 STK19B-204ENST00000512515 211 ntBASIC15.83■□□□□ 0.12
CDH12P55289 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDH12P55289 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH12P55289 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH12P55289 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH12P55289 AP002414.4-201ENST00000589764 1148 ntBASIC15.83■□□□□ 0.12
CDH12P55289 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH12P55289 Z69720.1-201ENST00000601483 472 ntBASIC15.83■□□□□ 0.12
CDH12P55289 AD001527.2-201ENST00000622994 785 ntBASIC15.83■□□□□ 0.12
CDH12P55289 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH12P55289 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDH12P55289 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CDH12P55289 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
CDH12P55289 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CDH12P55289 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CDH12P55289 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH12P55289 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH12P55289 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH12P55289 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH12P55289 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH12P55289 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH12P55289 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH12P55289 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH12P55289 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CDH12P55289 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH12P55289 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH12P55289 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CDH12P55289 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH12P55289 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH12P55289 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
CDH12P55289 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH12P55289 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH12P55289 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms