Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC112482.1-201ENST00000492080 688 ntBASIC17.27■□□□□ 0.36
CDH4P55283 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.27■□□□□ 0.36
CDH4P55283 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH4P55283 CYP2A7P1-201ENST00000595391 815 ntBASIC17.27■□□□□ 0.36
CDH4P55283 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH4P55283 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CDH4P55283 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH4P55283 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH4P55283 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH4P55283 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CDH4P55283 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH4P55283 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CDH4P55283 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CDH4P55283 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH4P55283 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH4P55283 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDH4P55283 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH4P55283 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDH4P55283 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH4P55283 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.26■□□□□ 0.35
CDH4P55283 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.26■□□□□ 0.35
CDH4P55283 MKNK2P1-201ENST00000437526 628 ntBASIC17.26■□□□□ 0.35
CDH4P55283 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.26■□□□□ 0.35
CDH4P55283 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH4P55283 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH4P55283 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.26■□□□□ 0.35
CDH4P55283 AC005829.1-201ENST00000570002 483 ntBASIC17.26■□□□□ 0.35
CDH4P55283 AP002472.1-201ENST00000577490 586 ntBASIC17.26■□□□□ 0.35
CDH4P55283 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH4P55283 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDH4P55283 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH4P55283 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH4P55283 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH4P55283 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
CDH4P55283 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH4P55283 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CDH4P55283 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 AC092919.2-201ENST00000623631 1645 ntBASIC17.25■□□□□ 0.35
CDH4P55283 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CDH4P55283 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH4P55283 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH4P55283 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH4P55283 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.25■□□□□ 0.35
CDH4P55283 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH4P55283 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH4P55283 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH4P55283 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.25■□□□□ 0.35
CDH4P55283 AC112191.1-201ENST00000523689 701 ntBASIC17.25■□□□□ 0.35
CDH4P55283 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.25■□□□□ 0.35
CDH4P55283 AC091812.2-201ENST00000619081 385 ntBASIC17.25■□□□□ 0.35
CDH4P55283 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CDH4P55283 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH4P55283 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH4P55283 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH4P55283 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CDH4P55283 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.25■□□□□ 0.35
CDH4P55283 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDH4P55283 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CDH4P55283 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.25■□□□□ 0.35
CDH4P55283 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH4P55283 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH4P55283 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH4P55283 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDH4P55283 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.24■□□□□ 0.35
CDH4P55283 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDH4P55283 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.24■□□□□ 0.35
CDH4P55283 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.24■□□□□ 0.35
CDH4P55283 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.24■□□□□ 0.35
CDH4P55283 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.24■□□□□ 0.35
CDH4P55283 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms