Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A1P52655 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.67■□□□□ 0.26
GTF2A1P52655 RARRES2P6-201ENST00000567333 442 ntBASIC16.67■□□□□ 0.26
GTF2A1P52655 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.67■□□□□ 0.26
GTF2A1P52655 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A1P52655 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A1P52655 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.67■□□□□ 0.26
GTF2A1P52655 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
GTF2A1P52655 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A1P52655 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
GTF2A1P52655 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A1P52655 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
GTF2A1P52655 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GTF2A1P52655 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GTF2A1P52655 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GTF2A1P52655 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
GTF2A1P52655 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GTF2A1P52655 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GTF2A1P52655 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.66■□□□□ 0.26
GTF2A1P52655 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.66■□□□□ 0.26
GTF2A1P52655 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.66■□□□□ 0.26
GTF2A1P52655 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.66■□□□□ 0.26
GTF2A1P52655 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.66■□□□□ 0.26
GTF2A1P52655 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
GTF2A1P52655 MYO15B-237ENST00000642007 4893 ntBASIC16.66■□□□□ 0.26
GTF2A1P52655 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GTF2A1P52655 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 CICP8-201ENST00000455800 2813 ntBASIC16.66■□□□□ 0.26
GTF2A1P52655 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GTF2A1P52655 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.66■□□□□ 0.26
GTF2A1P52655 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.66■□□□□ 0.26
GTF2A1P52655 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A1P52655 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GTF2A1P52655 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GTF2A1P52655 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GTF2A1P52655 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
GTF2A1P52655 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GTF2A1P52655 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.65■□□□□ 0.26
GTF2A1P52655 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
GTF2A1P52655 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.65■□□□□ 0.26
GTF2A1P52655 AC120498.8-201ENST00000614275 531 ntBASIC16.65■□□□□ 0.26
GTF2A1P52655 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.65■□□□□ 0.26
GTF2A1P52655 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GTF2A1P52655 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.65■□□□□ 0.26
GTF2A1P52655 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GTF2A1P52655 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
GTF2A1P52655 LINC00304-203ENST00000565008 1864 ntBASIC16.65■□□□□ 0.26
GTF2A1P52655 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 HAL-202ENST00000538703 2637 ntTSL 2 BASIC16.65■□□□□ 0.26
GTF2A1P52655 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GTF2A1P52655 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.65■□□□□ 0.26
GTF2A1P52655 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.64■□□□□ 0.26
GTF2A1P52655 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
GTF2A1P52655 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.64■□□□□ 0.25
GTF2A1P52655 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms