Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
CX3CR1P49238 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CX3CR1P49238 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CX3CR1P49238 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 DOC2GP-204ENST00000639052 2548 ntBASIC14.94□□□□□ -0.02
CX3CR1P49238 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CX3CR1P49238 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.94□□□□□ -0.02
CX3CR1P49238 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.93□□□□□ -0.02
CX3CR1P49238 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.93□□□□□ -0.02
CX3CR1P49238 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CX3CR1P49238 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.93□□□□□ -0.02
CX3CR1P49238 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CX3CR1P49238 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CX3CR1P49238 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.93□□□□□ -0.02
CX3CR1P49238 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CX3CR1P49238 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CX3CR1P49238 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CX3CR1P49238 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.93□□□□□ -0.02
CX3CR1P49238 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.93□□□□□ -0.02
CX3CR1P49238 UPK3BP1-201ENST00000428678 509 ntBASIC14.93□□□□□ -0.02
CX3CR1P49238 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.93□□□□□ -0.02
CX3CR1P49238 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.93□□□□□ -0.02
CX3CR1P49238 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.93□□□□□ -0.02
CX3CR1P49238 FOSL1P1-201ENST00000511041 816 ntBASIC14.93□□□□□ -0.02
CX3CR1P49238 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.93□□□□□ -0.02
CX3CR1P49238 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.93□□□□□ -0.02
CX3CR1P49238 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 AP001269.4-201ENST00000609611 512 ntBASIC14.93□□□□□ -0.02
CX3CR1P49238 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CX3CR1P49238 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.93□□□□□ -0.02
CX3CR1P49238 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.93□□□□□ -0.02
CX3CR1P49238 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.93□□□□□ -0.02
CX3CR1P49238 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.93□□□□□ -0.02
CX3CR1P49238 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CX3CR1P49238 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CX3CR1P49238 AL391005.1-201ENST00000623953 2435 ntBASIC14.93□□□□□ -0.02
CX3CR1P49238 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.93□□□□□ -0.02
CX3CR1P49238 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CX3CR1P49238 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 TUBB8P12-201ENST00000308911 1335 ntBASIC14.92□□□□□ -0.02
CX3CR1P49238 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 TUBB7P-202ENST00000428444 1305 ntBASIC14.92□□□□□ -0.02
CX3CR1P49238 TUBB8P7-204ENST00000567960 1332 ntBASIC14.92□□□□□ -0.02
CX3CR1P49238 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 AP005117.1-201ENST00000584346 1413 ntBASIC14.92□□□□□ -0.02
CX3CR1P49238 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CX3CR1P49238 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.92□□□□□ -0.02
CX3CR1P49238 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 AC132008.2-207ENST00000454517 770 ntBASIC14.92□□□□□ -0.02
CX3CR1P49238 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.92□□□□□ -0.02
CX3CR1P49238 BX005266.1-201ENST00000473402 457 ntBASIC14.92□□□□□ -0.02
CX3CR1P49238 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CX3CR1P49238 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.92□□□□□ -0.02
CX3CR1P49238 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.92□□□□□ -0.02
CX3CR1P49238 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.92□□□□□ -0.02
CX3CR1P49238 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.92□□□□□ -0.02
CX3CR1P49238 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CX3CR1P49238 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.92□□□□□ -0.02
CX3CR1P49238 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.92□□□□□ -0.02
CX3CR1P49238 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CX3CR1P49238 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.92□□□□□ -0.02
CX3CR1P49238 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.92□□□□□ -0.02
CX3CR1P49238 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CX3CR1P49238 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms