Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRCC3P46736 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
BRCC3P46736 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.96■□□□□ 0.47
BRCC3P46736 FAM58DP-201ENST00000428076 619 ntBASIC17.96■□□□□ 0.47
BRCC3P46736 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.96■□□□□ 0.47
BRCC3P46736 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BRCC3P46736 RN7SL589P-201ENST00000481268 310 ntBASIC17.96■□□□□ 0.47
BRCC3P46736 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
BRCC3P46736 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.96■□□□□ 0.47
BRCC3P46736 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
BRCC3P46736 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.96■□□□□ 0.47
BRCC3P46736 MIR4492-201ENST00000581627 80 ntBASIC17.96■□□□□ 0.47
BRCC3P46736 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.96■□□□□ 0.47
BRCC3P46736 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
BRCC3P46736 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.96■□□□□ 0.47
BRCC3P46736 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.96■□□□□ 0.47
BRCC3P46736 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.96■□□□□ 0.47
BRCC3P46736 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRCC3P46736 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRCC3P46736 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
BRCC3P46736 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BRCC3P46736 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRCC3P46736 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BRCC3P46736 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BRCC3P46736 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
BRCC3P46736 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.96■□□□□ 0.47
BRCC3P46736 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
BRCC3P46736 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.96■□□□□ 0.46
BRCC3P46736 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
BRCC3P46736 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
BRCC3P46736 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
BRCC3P46736 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
BRCC3P46736 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
BRCC3P46736 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.95■□□□□ 0.46
BRCC3P46736 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
BRCC3P46736 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.95■□□□□ 0.46
BRCC3P46736 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.95■□□□□ 0.46
BRCC3P46736 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.95■□□□□ 0.46
BRCC3P46736 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 AC124947.2-201ENST00000547118 1133 ntBASIC17.95■□□□□ 0.46
BRCC3P46736 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.95■□□□□ 0.46
BRCC3P46736 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.95■□□□□ 0.46
BRCC3P46736 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 AC009093.7-201ENST00000623853 1223 ntBASIC17.95■□□□□ 0.46
BRCC3P46736 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 AP001350.2-201ENST00000625104 1094 ntBASIC17.95■□□□□ 0.46
BRCC3P46736 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.95■□□□□ 0.46
BRCC3P46736 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.95■□□□□ 0.46
BRCC3P46736 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.95■□□□□ 0.46
BRCC3P46736 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
BRCC3P46736 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BRCC3P46736 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BRCC3P46736 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.95■□□□□ 0.46
BRCC3P46736 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
BRCC3P46736 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.94■□□□□ 0.46
BRCC3P46736 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.94■□□□□ 0.46
BRCC3P46736 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.94■□□□□ 0.46
BRCC3P46736 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.94■□□□□ 0.46
BRCC3P46736 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.94■□□□□ 0.46
BRCC3P46736 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.94■□□□□ 0.46
BRCC3P46736 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.94■□□□□ 0.46
BRCC3P46736 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
BRCC3P46736 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.94■□□□□ 0.46
BRCC3P46736 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BRCC3P46736 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BRCC3P46736 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.93■□□□□ 0.46
BRCC3P46736 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms