Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.25□□□□□ -0.13
LMO1P25800 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.25□□□□□ -0.13
LMO1P25800 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.25□□□□□ -0.13
LMO1P25800 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.25□□□□□ -0.13
LMO1P25800 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.25□□□□□ -0.13
LMO1P25800 PAWRP1-201ENST00000451083 565 ntBASIC14.25□□□□□ -0.13
LMO1P25800 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
LMO1P25800 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.25□□□□□ -0.13
LMO1P25800 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.25□□□□□ -0.13
LMO1P25800 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.25□□□□□ -0.13
LMO1P25800 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.25□□□□□ -0.13
LMO1P25800 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LMO1P25800 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.25□□□□□ -0.13
LMO1P25800 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.25□□□□□ -0.13
LMO1P25800 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LMO1P25800 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.25□□□□□ -0.13
LMO1P25800 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LMO1P25800 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO1P25800 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO1P25800 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO1P25800 KRT8P49-201ENST00000604166 1432 ntBASIC14.24□□□□□ -0.13
LMO1P25800 AL645728.1-201ENST00000366221 2101 ntBASIC14.24□□□□□ -0.13
LMO1P25800 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO1P25800 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO1P25800 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO1P25800 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO1P25800 LINC00895-201ENST00000629028 1637 ntBASIC14.24□□□□□ -0.13
LMO1P25800 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
LMO1P25800 AC026396.1-201ENST00000419388 421 ntBASIC14.24□□□□□ -0.13
LMO1P25800 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.24□□□□□ -0.13
LMO1P25800 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.24□□□□□ -0.13
LMO1P25800 AF238378.1-201ENST00000526806 358 ntBASIC14.24□□□□□ -0.13
LMO1P25800 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO1P25800 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO1P25800 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO1P25800 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO1P25800 AF228730.7-201ENST00000641842 219 ntBASIC14.24□□□□□ -0.13
LMO1P25800 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LMO1P25800 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO1P25800 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LMO1P25800 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO1P25800 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO1P25800 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LMO1P25800 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LMO1P25800 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO1P25800 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LMO1P25800 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.23□□□□□ -0.13
LMO1P25800 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.23□□□□□ -0.13
LMO1P25800 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LMO1P25800 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO1P25800 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO1P25800 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms