Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RAB4AP20338 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB4AP20338 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RAB4AP20338 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB4AP20338 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RAB4AP20338 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB4AP20338 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB4AP20338 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB4AP20338 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB4AP20338 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.04□□□□□ -0.32
RAB4AP20338 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.04□□□□□ -0.32
RAB4AP20338 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB4AP20338 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
RAB4AP20338 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB4AP20338 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
RAB4AP20338 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
RAB4AP20338 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB4AP20338 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.04□□□□□ -0.32
RAB4AP20338 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB4AP20338 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RAB4AP20338 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB4AP20338 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RAB4AP20338 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB4AP20338 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RAB4AP20338 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
RAB4AP20338 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RAB4AP20338 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.03□□□□□ -0.32
RAB4AP20338 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB4AP20338 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.03□□□□□ -0.32
RAB4AP20338 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.03□□□□□ -0.32
RAB4AP20338 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.03□□□□□ -0.32
RAB4AP20338 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RAB4AP20338 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RAB4AP20338 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RAB4AP20338 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RAB4AP20338 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB4AP20338 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB4AP20338 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms