Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC2P18074 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ERCC2P18074 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.44■□□□□ 0.38
ERCC2P18074 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ERCC2P18074 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.44■□□□□ 0.38
ERCC2P18074 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.43■□□□□ 0.38
ERCC2P18074 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.43■□□□□ 0.38
ERCC2P18074 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.43■□□□□ 0.38
ERCC2P18074 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
ERCC2P18074 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ERCC2P18074 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ERCC2P18074 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ERCC2P18074 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.43■□□□□ 0.38
ERCC2P18074 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 AC009947.1-201ENST00000444350 727 ntBASIC17.43■□□□□ 0.38
ERCC2P18074 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.43■□□□□ 0.38
ERCC2P18074 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.43■□□□□ 0.38
ERCC2P18074 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.43■□□□□ 0.38
ERCC2P18074 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.43■□□□□ 0.38
ERCC2P18074 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.43■□□□□ 0.38
ERCC2P18074 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.43■□□□□ 0.38
ERCC2P18074 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.43■□□□□ 0.38
ERCC2P18074 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.43■□□□□ 0.38
ERCC2P18074 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.43■□□□□ 0.38
ERCC2P18074 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
ERCC2P18074 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ERCC2P18074 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.43■□□□□ 0.38
ERCC2P18074 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.43■□□□□ 0.38
ERCC2P18074 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.43■□□□□ 0.38
ERCC2P18074 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ERCC2P18074 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.42■□□□□ 0.38
ERCC2P18074 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ERCC2P18074 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.42■□□□□ 0.38
ERCC2P18074 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.42■□□□□ 0.38
ERCC2P18074 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.42■□□□□ 0.38
ERCC2P18074 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.42■□□□□ 0.38
ERCC2P18074 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
ERCC2P18074 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.42■□□□□ 0.38
ERCC2P18074 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.42■□□□□ 0.38
ERCC2P18074 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
ERCC2P18074 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.42■□□□□ 0.38
ERCC2P18074 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.42■□□□□ 0.38
ERCC2P18074 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
ERCC2P18074 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ERCC2P18074 LINC00895-201ENST00000629028 1637 ntBASIC17.42■□□□□ 0.38
ERCC2P18074 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
ERCC2P18074 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.42■□□□□ 0.38
ERCC2P18074 AC129492.6-201ENST00000611383 1305 ntBASIC17.42■□□□□ 0.38
ERCC2P18074 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ERCC2P18074 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.42■□□□□ 0.38
ERCC2P18074 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC2P18074 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC2P18074 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC2P18074 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC2P18074 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
ERCC2P18074 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC2P18074 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC2P18074 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC2P18074 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC2P18074 AL603756.1-201ENST00000606511 2163 ntBASIC17.41■□□□□ 0.38
ERCC2P18074 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC2P18074 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
ERCC2P18074 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
ERCC2P18074 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.41■□□□□ 0.38
ERCC2P18074 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.41■□□□□ 0.38
ERCC2P18074 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.41■□□□□ 0.38
ERCC2P18074 MIR4751-201ENST00000578027 74 ntBASIC17.41■□□□□ 0.38
ERCC2P18074 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ERCC2P18074 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms