Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.74■□□□□ 0.11
PEPDP12955 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.74■□□□□ 0.11
PEPDP12955 LINC02012-201ENST00000608206 1725 ntBASIC15.74■□□□□ 0.11
PEPDP12955 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.74■□□□□ 0.11
PEPDP12955 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.74■□□□□ 0.11
PEPDP12955 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PEPDP12955 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.74■□□□□ 0.11
PEPDP12955 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.74■□□□□ 0.11
PEPDP12955 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PEPDP12955 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.74■□□□□ 0.11
PEPDP12955 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PEPDP12955 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.74■□□□□ 0.11
PEPDP12955 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.74■□□□□ 0.11
PEPDP12955 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.74■□□□□ 0.11
PEPDP12955 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PEPDP12955 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PEPDP12955 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.74■□□□□ 0.11
PEPDP12955 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.74■□□□□ 0.11
PEPDP12955 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PEPDP12955 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.74■□□□□ 0.11
PEPDP12955 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.74■□□□□ 0.11
PEPDP12955 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.74■□□□□ 0.11
PEPDP12955 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PEPDP12955 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PEPDP12955 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.73■□□□□ 0.11
PEPDP12955 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 HLA-A-201ENST00000376802 1334 ntBASIC15.73■□□□□ 0.11
PEPDP12955 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
PEPDP12955 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
PEPDP12955 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PEPDP12955 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PEPDP12955 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PEPDP12955 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PEPDP12955 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PEPDP12955 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.73■□□□□ 0.11
PEPDP12955 AC079776.4-201ENST00000511039 504 ntBASIC15.73■□□□□ 0.11
PEPDP12955 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.73■□□□□ 0.11
PEPDP12955 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.73■□□□□ 0.11
PEPDP12955 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.73■□□□□ 0.11
PEPDP12955 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PEPDP12955 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PEPDP12955 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PEPDP12955 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PEPDP12955 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
PEPDP12955 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 AL162727.3-201ENST00000635661 2787 ntBASIC15.72■□□□□ 0.11
PEPDP12955 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
PEPDP12955 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
PEPDP12955 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.72■□□□□ 0.11
PEPDP12955 AC093525.9-201ENST00000624961 1746 ntBASIC15.72■□□□□ 0.11
PEPDP12955 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.72■□□□□ 0.11
PEPDP12955 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 AL391005.1-201ENST00000623953 2435 ntBASIC15.72■□□□□ 0.11
PEPDP12955 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.72■□□□□ 0.11
PEPDP12955 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PEPDP12955 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms