Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.26□□□□□ -0.29
CD28P10747 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.26□□□□□ -0.29
CD28P10747 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CD28P10747 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.26□□□□□ -0.29
CD28P10747 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.26□□□□□ -0.29
CD28P10747 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CD28P10747 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CD28P10747 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
CD28P10747 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CD28P10747 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
CD28P10747 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CD28P10747 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.25□□□□□ -0.29
CD28P10747 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CD28P10747 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CD28P10747 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.25□□□□□ -0.29
CD28P10747 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.25□□□□□ -0.29
CD28P10747 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.25□□□□□ -0.29
CD28P10747 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CD28P10747 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CD28P10747 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.25□□□□□ -0.29
CD28P10747 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.25□□□□□ -0.29
CD28P10747 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CD28P10747 AC002056.1-201ENST00000395613 760 ntBASIC13.25□□□□□ -0.29
CD28P10747 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.25□□□□□ -0.29
CD28P10747 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CD28P10747 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.25□□□□□ -0.29
CD28P10747 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CD28P10747 TIMM8BP1-201ENST00000452384 211 ntBASIC13.25□□□□□ -0.29
CD28P10747 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CD28P10747 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
CD28P10747 AC107918.2-201ENST00000530817 355 ntBASIC13.25□□□□□ -0.29
CD28P10747 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.25□□□□□ -0.29
CD28P10747 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.25□□□□□ -0.29
CD28P10747 AC022145.2-201ENST00000598203 171 ntBASIC13.25□□□□□ -0.29
CD28P10747 LINC02084-201ENST00000606069 1096 ntBASIC13.25□□□□□ -0.29
CD28P10747 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.25□□□□□ -0.29
CD28P10747 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.25□□□□□ -0.29
CD28P10747 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.25□□□□□ -0.29
CD28P10747 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.25□□□□□ -0.29
CD28P10747 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CD28P10747 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.25□□□□□ -0.29
CD28P10747 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CD28P10747 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD28P10747 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.24□□□□□ -0.29
CD28P10747 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.24□□□□□ -0.29
CD28P10747 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.24□□□□□ -0.29
CD28P10747 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CD28P10747 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CD28P10747 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CD28P10747 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.24□□□□□ -0.29
CD28P10747 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
CD28P10747 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.24□□□□□ -0.29
CD28P10747 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CD28P10747 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
CD28P10747 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CD28P10747 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.24□□□□□ -0.29
CD28P10747 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 FLJ16779-201ENST00000612722 7638 ntBASIC13.24□□□□□ -0.29
CD28P10747 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.24□□□□□ -0.29
CD28P10747 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CD28P10747 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.24□□□□□ -0.29
CD28P10747 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.24□□□□□ -0.29
CD28P10747 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
CD28P10747 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CD28P10747 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms