Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
CCDC175P0C221 AL353593.2-201ENST00000602529 1483 ntBASIC18.36■□□□□ 0.53
CCDC175P0C221 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCDC175P0C221 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC175P0C221 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC175P0C221 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC175P0C221 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC175P0C221 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCDC175P0C221 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC175P0C221 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC175P0C221 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CCDC175P0C221 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC175P0C221 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC175P0C221 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC175P0C221 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC175P0C221 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC175P0C221 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC175P0C221 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC175P0C221 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC175P0C221 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC175P0C221 COX11P1-201ENST00000489116 835 ntBASIC18.35■□□□□ 0.53
CCDC175P0C221 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC175P0C221 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC175P0C221 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC175P0C221 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC175P0C221 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC175P0C221 AL513477.1-201ENST00000602865 2407 ntBASIC18.35■□□□□ 0.53
CCDC175P0C221 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC175P0C221 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC175P0C221 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC175P0C221 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC175P0C221 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC175P0C221 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CCDC175P0C221 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC175P0C221 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC175P0C221 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC175P0C221 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 FAM220CP-201ENST00000395253 831 ntBASIC18.34■□□□□ 0.53
CCDC175P0C221 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
CCDC175P0C221 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CCDC175P0C221 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC175P0C221 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CCDC175P0C221 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC175P0C221 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC175P0C221 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC175P0C221 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.34■□□□□ 0.53
CCDC175P0C221 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC175P0C221 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC175P0C221 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC175P0C221 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC175P0C221 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC175P0C221 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC175P0C221 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC175P0C221 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC175P0C221 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC175P0C221 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC175P0C221 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC175P0C221 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms