Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.29□□□□□ -0.12
CD74P04233 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.29□□□□□ -0.12
CD74P04233 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.29□□□□□ -0.12
CD74P04233 AL139011.1-202ENST00000642063 584 ntBASIC14.29□□□□□ -0.12
CD74P04233 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CD74P04233 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 AC099063.4-201ENST00000641099 1602 ntBASIC14.29□□□□□ -0.12
CD74P04233 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CD74P04233 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.29□□□□□ -0.12
CD74P04233 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD74P04233 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CD74P04233 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.29□□□□□ -0.12
CD74P04233 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CD74P04233 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD74P04233 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CD74P04233 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CD74P04233 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CD74P04233 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.28□□□□□ -0.12
CD74P04233 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CD74P04233 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.28□□□□□ -0.12
CD74P04233 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 AL158047.1-201ENST00000445918 881 ntBASIC14.28□□□□□ -0.12
CD74P04233 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.28□□□□□ -0.12
CD74P04233 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 STK19B-204ENST00000512515 211 ntBASIC14.28□□□□□ -0.12
CD74P04233 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.28□□□□□ -0.12
CD74P04233 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.28□□□□□ -0.12
CD74P04233 ZNF444P1-201ENST00000559497 298 ntBASIC14.28□□□□□ -0.12
CD74P04233 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.28□□□□□ -0.12
CD74P04233 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.28□□□□□ -0.12
CD74P04233 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.28□□□□□ -0.12
CD74P04233 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 AC002310.6-201ENST00000624451 1377 ntBASIC14.28□□□□□ -0.12
CD74P04233 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CD74P04233 LINC02228-204ENST00000642115 2962 ntBASIC14.28□□□□□ -0.12
CD74P04233 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD74P04233 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CD74P04233 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD74P04233 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.27□□□□□ -0.12
CD74P04233 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD74P04233 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD74P04233 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.27□□□□□ -0.12
CD74P04233 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD74P04233 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.27□□□□□ -0.12
CD74P04233 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CD74P04233 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD74P04233 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.27□□□□□ -0.12
CD74P04233 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.27□□□□□ -0.12
CD74P04233 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CD74P04233 AC125634.1-201ENST00000438758 1403 ntBASIC14.27□□□□□ -0.12
CD74P04233 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.27□□□□□ -0.13
CD74P04233 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.27□□□□□ -0.13
CD74P04233 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.27□□□□□ -0.13
CD74P04233 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.27□□□□□ -0.13
CD74P04233 AL355075.4-201ENST00000554988 638 ntBASIC14.27□□□□□ -0.13
CD74P04233 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.27□□□□□ -0.13
CD74P04233 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.27□□□□□ -0.13
CD74P04233 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CD74P04233 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.27□□□□□ -0.13
CD74P04233 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CD74P04233 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms