Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UPK1BO75841 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK1BO75841 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
UPK1BO75841 TUBB7P-202ENST00000428444 1305 ntBASIC14.79□□□□□ -0.04
UPK1BO75841 KRT18P65-201ENST00000439811 1286 ntBASIC14.79□□□□□ -0.04
UPK1BO75841 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK1BO75841 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK1BO75841 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.79□□□□□ -0.04
UPK1BO75841 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
UPK1BO75841 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.79□□□□□ -0.04
UPK1BO75841 TUBB8P7-204ENST00000567960 1332 ntBASIC14.79□□□□□ -0.04
UPK1BO75841 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.79□□□□□ -0.04
UPK1BO75841 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK1BO75841 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 AC006449.6-201ENST00000612330 2296 ntBASIC14.79□□□□□ -0.04
UPK1BO75841 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.79□□□□□ -0.04
UPK1BO75841 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UPK1BO75841 AC007191.1-201ENST00000623179 2995 ntBASIC14.79□□□□□ -0.04
UPK1BO75841 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
UPK1BO75841 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.79□□□□□ -0.04
UPK1BO75841 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1BO75841 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 AL109954.1-202ENST00000564051 2148 ntBASIC14.78□□□□□ -0.04
UPK1BO75841 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 AC112504.1-201ENST00000623415 1841 ntBASIC14.78□□□□□ -0.04
UPK1BO75841 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
UPK1BO75841 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
UPK1BO75841 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1BO75841 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.78□□□□□ -0.04
UPK1BO75841 KRT16P5-201ENST00000455284 522 ntBASIC14.78□□□□□ -0.04
UPK1BO75841 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.78□□□□□ -0.04
UPK1BO75841 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK1BO75841 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1BO75841 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1BO75841 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK1BO75841 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1BO75841 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UPK1BO75841 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.78□□□□□ -0.04
UPK1BO75841 AL139246.5-201ENST00000606645 996 ntBASIC14.78□□□□□ -0.04
UPK1BO75841 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.78□□□□□ -0.04
UPK1BO75841 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
UPK1BO75841 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1BO75841 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.78□□□□□ -0.04
UPK1BO75841 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.78□□□□□ -0.04
UPK1BO75841 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.78□□□□□ -0.04
UPK1BO75841 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
UPK1BO75841 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.78□□□□□ -0.04
UPK1BO75841 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1BO75841 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1BO75841 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.77□□□□□ -0.04
UPK1BO75841 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
UPK1BO75841 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1BO75841 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.77□□□□□ -0.04
UPK1BO75841 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.77□□□□□ -0.04
UPK1BO75841 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1BO75841 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
UPK1BO75841 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1BO75841 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1BO75841 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1BO75841 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1BO75841 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.77□□□□□ -0.04
UPK1BO75841 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1BO75841 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1BO75841 AC002310.6-201ENST00000624451 1377 ntBASIC14.77□□□□□ -0.04
UPK1BO75841 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1BO75841 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
UPK1BO75841 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1BO75841 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.77□□□□□ -0.04
UPK1BO75841 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1BO75841 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
UPK1BO75841 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.77□□□□□ -0.05
UPK1BO75841 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
UPK1BO75841 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.77□□□□□ -0.05
UPK1BO75841 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1BO75841 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.77□□□□□ -0.05
UPK1BO75841 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1BO75841 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.77□□□□□ -0.05
UPK1BO75841 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1BO75841 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
UPK1BO75841 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms