Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PDCD6O75340 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDCD6O75340 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.34□□□□□ -0.11
PDCD6O75340 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.34□□□□□ -0.11
PDCD6O75340 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDCD6O75340 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDCD6O75340 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.34□□□□□ -0.11
PDCD6O75340 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDCD6O75340 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDCD6O75340 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.34□□□□□ -0.11
PDCD6O75340 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDCD6O75340 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDCD6O75340 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDCD6O75340 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDCD6O75340 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PDCD6O75340 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDCD6O75340 AC004817.3-201ENST00000602957 2129 ntBASIC14.33□□□□□ -0.11
PDCD6O75340 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDCD6O75340 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.33□□□□□ -0.11
PDCD6O75340 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PDCD6O75340 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDCD6O75340 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.33□□□□□ -0.11
PDCD6O75340 AL391005.1-201ENST00000623953 2435 ntBASIC14.33□□□□□ -0.12
PDCD6O75340 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.33□□□□□ -0.12
PDCD6O75340 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PDCD6O75340 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.33□□□□□ -0.12
PDCD6O75340 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.33□□□□□ -0.12
PDCD6O75340 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PDCD6O75340 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.33□□□□□ -0.12
PDCD6O75340 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.33□□□□□ -0.12
PDCD6O75340 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 PCED1CP-201ENST00000419887 785 ntBASIC14.33□□□□□ -0.12
PDCD6O75340 LINC00982-205ENST00000420957 435 ntBASIC14.33□□□□□ -0.12
PDCD6O75340 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.33□□□□□ -0.12
PDCD6O75340 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.33□□□□□ -0.12
PDCD6O75340 AC104819.1-201ENST00000504587 486 ntBASIC14.33□□□□□ -0.12
PDCD6O75340 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.33□□□□□ -0.12
PDCD6O75340 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 AC092329.2-201ENST00000598402 547 ntBASIC14.33□□□□□ -0.12
PDCD6O75340 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.33□□□□□ -0.12
PDCD6O75340 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PDCD6O75340 AC073592.4-201ENST00000623827 446 ntBASIC14.33□□□□□ -0.12
PDCD6O75340 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.33□□□□□ -0.12
PDCD6O75340 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
PDCD6O75340 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PDCD6O75340 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
PDCD6O75340 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PDCD6O75340 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.33□□□□□ -0.12
PDCD6O75340 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 IER3-202ENST00000376377 1350 ntBASIC14.33□□□□□ -0.12
PDCD6O75340 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PDCD6O75340 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 AL662844.4-201ENST00000606367 2838 ntBASIC14.33□□□□□ -0.12
PDCD6O75340 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDCD6O75340 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PDCD6O75340 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PDCD6O75340 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.32□□□□□ -0.12
PDCD6O75340 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.32□□□□□ -0.12
PDCD6O75340 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.32□□□□□ -0.12
PDCD6O75340 ABCD1P5-201ENST00000445663 754 ntBASIC14.32□□□□□ -0.12
PDCD6O75340 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.32□□□□□ -0.12
PDCD6O75340 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
PDCD6O75340 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.32□□□□□ -0.12
PDCD6O75340 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.32□□□□□ -0.12
PDCD6O75340 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.32□□□□□ -0.12
PDCD6O75340 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDCD6O75340 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms