Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DLX3O60479 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.65■□□□□ 0.26
DLX3O60479 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DLX3O60479 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
DLX3O60479 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.64■□□□□ 0.26
DLX3O60479 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.64■□□□□ 0.25
DLX3O60479 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
DLX3O60479 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.64■□□□□ 0.25
DLX3O60479 ME2P1-201ENST00000426028 1970 ntBASIC16.64■□□□□ 0.25
DLX3O60479 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
DLX3O60479 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 KRT8P49-201ENST00000604166 1432 ntBASIC16.64■□□□□ 0.25
DLX3O60479 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.64■□□□□ 0.25
DLX3O60479 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.64■□□□□ 0.25
DLX3O60479 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.64■□□□□ 0.25
DLX3O60479 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
DLX3O60479 HLA-J-202ENST00000469281 1241 ntBASIC16.64■□□□□ 0.25
DLX3O60479 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 AC104819.1-201ENST00000504587 486 ntBASIC16.64■□□□□ 0.25
DLX3O60479 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.64■□□□□ 0.25
DLX3O60479 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
DLX3O60479 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.64■□□□□ 0.25
DLX3O60479 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.64■□□□□ 0.25
DLX3O60479 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
DLX3O60479 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.64■□□□□ 0.25
DLX3O60479 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 AC005052.1-201ENST00000625181 2492 ntBASIC16.64■□□□□ 0.25
DLX3O60479 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
DLX3O60479 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.64■□□□□ 0.25
DLX3O60479 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 AL590787.1-201ENST00000568856 1315 ntBASIC16.64■□□□□ 0.25
DLX3O60479 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.64■□□□□ 0.25
DLX3O60479 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DLX3O60479 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.64■□□□□ 0.25
DLX3O60479 AC243591.1-201ENST00000452967 1364 ntBASIC16.64■□□□□ 0.25
DLX3O60479 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.64■□□□□ 0.25
DLX3O60479 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.64■□□□□ 0.25
DLX3O60479 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.63■□□□□ 0.25
DLX3O60479 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
DLX3O60479 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.63■□□□□ 0.25
DLX3O60479 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.63■□□□□ 0.25
DLX3O60479 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 CROCCP1-201ENST00000426910 5675 ntBASIC16.63■□□□□ 0.25
DLX3O60479 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.63■□□□□ 0.25
DLX3O60479 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
DLX3O60479 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
DLX3O60479 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.63■□□□□ 0.25
DLX3O60479 NPAP1P7-201ENST00000613027 823 ntBASIC16.63■□□□□ 0.25
DLX3O60479 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
DLX3O60479 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
DLX3O60479 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
DLX3O60479 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.63■□□□□ 0.25
DLX3O60479 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.63■□□□□ 0.25
DLX3O60479 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
DLX3O60479 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.63■□□□□ 0.25
DLX3O60479 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DLX3O60479 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.63■□□□□ 0.25
DLX3O60479 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.62■□□□□ 0.25
DLX3O60479 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DLX3O60479 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DLX3O60479 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.62■□□□□ 0.25
DLX3O60479 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DLX3O60479 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
DLX3O60479 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.62■□□□□ 0.25
DLX3O60479 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DLX3O60479 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.62■□□□□ 0.25
DLX3O60479 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DLX3O60479 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms