Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AC067863.1-201ENST00000494933 530 ntBASIC16.18■□□□□ 0.18
DUX1O43812 AC124947.2-201ENST00000547118 1133 ntBASIC16.18■□□□□ 0.18
DUX1O43812 KRT8P23-201ENST00000560090 1207 ntBASIC16.18■□□□□ 0.18
DUX1O43812 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.18■□□□□ 0.18
DUX1O43812 AC011467.4-201ENST00000594891 528 ntBASIC16.18■□□□□ 0.18
DUX1O43812 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
DUX1O43812 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
DUX1O43812 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DUX1O43812 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DUX1O43812 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX1O43812 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DUX1O43812 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX1O43812 CROCCP2-202ENST00000412962 2773 ntBASIC16.18■□□□□ 0.18
DUX1O43812 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.18■□□□□ 0.18
DUX1O43812 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX1O43812 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
DUX1O43812 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX1O43812 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DUX1O43812 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX1O43812 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DUX1O43812 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.18■□□□□ 0.18
DUX1O43812 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
DUX1O43812 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX1O43812 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DUX1O43812 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.17■□□□□ 0.18
DUX1O43812 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.17■□□□□ 0.18
DUX1O43812 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DUX1O43812 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
DUX1O43812 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.17■□□□□ 0.18
DUX1O43812 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX1O43812 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX1O43812 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.17■□□□□ 0.18
DUX1O43812 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX1O43812 LINC02012-201ENST00000608206 1725 ntBASIC16.17■□□□□ 0.18
DUX1O43812 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.17■□□□□ 0.18
DUX1O43812 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX1O43812 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DUX1O43812 SPCS2P4-201ENST00000436160 681 ntBASIC16.17■□□□□ 0.18
DUX1O43812 CNN2P2-201ENST00000443536 909 ntBASIC16.17■□□□□ 0.18
DUX1O43812 CNN2P3-201ENST00000450201 906 ntBASIC16.17■□□□□ 0.18
DUX1O43812 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.17■□□□□ 0.18
DUX1O43812 AC069335.1-201ENST00000489972 472 ntBASIC16.17■□□□□ 0.18
DUX1O43812 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.17■□□□□ 0.18
DUX1O43812 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.17■□□□□ 0.18
DUX1O43812 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.17■□□□□ 0.18
DUX1O43812 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
DUX1O43812 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DUX1O43812 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.17■□□□□ 0.18
DUX1O43812 AL136317.3-201ENST00000618497 906 ntBASIC16.17■□□□□ 0.18
DUX1O43812 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.17■□□□□ 0.18
DUX1O43812 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.17■□□□□ 0.18
DUX1O43812 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX1O43812 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DUX1O43812 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DUX1O43812 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX1O43812 AC007613.1-201ENST00000572811 2597 ntBASIC16.17■□□□□ 0.18
DUX1O43812 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DUX1O43812 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
DUX1O43812 TUBB8P12-201ENST00000308911 1335 ntBASIC16.17■□□□□ 0.18
DUX1O43812 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX1O43812 TUBB7P-202ENST00000428444 1305 ntBASIC16.17■□□□□ 0.18
DUX1O43812 TUBB8P7-204ENST00000567960 1332 ntBASIC16.17■□□□□ 0.18
DUX1O43812 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
DUX1O43812 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.16■□□□□ 0.18
DUX1O43812 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.16■□□□□ 0.18
DUX1O43812 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 UXT-AS1-201ENST00000590504 1525 ntBASIC16.16■□□□□ 0.18
DUX1O43812 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.16■□□□□ 0.18
DUX1O43812 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
DUX1O43812 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.16■□□□□ 0.18
DUX1O43812 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DUX1O43812 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.16■□□□□ 0.18
DUX1O43812 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.16■□□□□ 0.18
DUX1O43812 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
DUX1O43812 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
DUX1O43812 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
DUX1O43812 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.16■□□□□ 0.18
DUX1O43812 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 CYP2A7P1-201ENST00000595391 815 ntBASIC16.16■□□□□ 0.18
DUX1O43812 AC093512.1-201ENST00000617969 520 ntBASIC16.16■□□□□ 0.18
DUX1O43812 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
DUX1O43812 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.16■□□□□ 0.18
DUX1O43812 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.16■□□□□ 0.18
DUX1O43812 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX1O43812 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms