Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 AL662844.1-201ENST00000546340 181 ntBASIC15.11■□□□□ 0.01
TRAF3IP2O43734 GGTLC5P-201ENST00000617623 998 ntBASIC15.11■□□□□ 0.01
TRAF3IP2O43734 REXO1L3P-201ENST00000622202 1288 ntBASIC15.11■□□□□ 0.01
TRAF3IP2O43734 AC005593.1-201ENST00000624894 515 ntBASIC15.11■□□□□ 0.01
TRAF3IP2O43734 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.11■□□□□ 0.01
TRAF3IP2O43734 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 AL645728.1-201ENST00000366221 2101 ntBASIC15.11■□□□□ 0.01
TRAF3IP2O43734 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 TOP3BP1-201ENST00000420768 1380 ntBASIC15.11■□□□□ 0.01
TRAF3IP2O43734 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP2O43734 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 AC092910.1-201ENST00000482027 1129 ntBASIC15.1■□□□□ 0.01
TRAF3IP2O43734 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 AP001005.1-201ENST00000571755 1248 ntBASIC15.1■□□□□ 0.01
TRAF3IP2O43734 AL121894.2-201ENST00000602977 491 ntBASIC15.1■□□□□ 0.01
TRAF3IP2O43734 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 FLJ38576-201ENST00000623820 2459 ntBASIC15.1■□□□□ 0.01
TRAF3IP2O43734 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAF3IP2O43734 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP2O43734 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms