Protein–RNA interactions for Protein: O43526

KCNQ2, Potassium voltage-gated channel subfamily KQT member 2, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2O43526 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC21.55■■□□□ 1.04
KCNQ2O43526 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ2O43526 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ2O43526 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ2O43526 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ2O43526 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ2O43526 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ2O43526 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ2O43526 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.54■■□□□ 1.04
KCNQ2O43526 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC21.54■■□□□ 1.04
KCNQ2O43526 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC21.54■■□□□ 1.04
KCNQ2O43526 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.54■■□□□ 1.04
KCNQ2O43526 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.54■■□□□ 1.04
KCNQ2O43526 FUZ-207ENST00000526575 482 ntTSL 4 BASIC21.54■■□□□ 1.04
KCNQ2O43526 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.54■■□□□ 1.04
KCNQ2O43526 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC21.54■■□□□ 1.04
KCNQ2O43526 AL109936.8-201ENST00000641772 604 ntBASIC21.54■■□□□ 1.04
KCNQ2O43526 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
KCNQ2O43526 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ2O43526 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ2O43526 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ2O43526 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KCNQ2O43526 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
KCNQ2O43526 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ2O43526 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNQ2O43526 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNQ2O43526 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
KCNQ2O43526 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ2O43526 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ2O43526 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNQ2O43526 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ2O43526 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ2O43526 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.53■■□□□ 1.04
KCNQ2O43526 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.53■■□□□ 1.04
KCNQ2O43526 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNQ2O43526 AC098818.2-201ENST00000564925 2320 ntBASIC21.53■■□□□ 1.04
KCNQ2O43526 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 KRT8P49-201ENST00000604166 1432 ntBASIC21.53■■□□□ 1.04
KCNQ2O43526 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ2O43526 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.53■■□□□ 1.04
KCNQ2O43526 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
KCNQ2O43526 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC21.53■■□□□ 1.04
KCNQ2O43526 AL138781.2-201ENST00000617896 1843 ntBASIC21.52■■□□□ 1.04
KCNQ2O43526 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.52■■□□□ 1.04
KCNQ2O43526 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
KCNQ2O43526 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.52■■□□□ 1.04
KCNQ2O43526 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ2O43526 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ2O43526 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ2O43526 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ2O43526 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ2O43526 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
KCNQ2O43526 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ2O43526 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ2O43526 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ2O43526 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
KCNQ2O43526 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.52■■□□□ 1.04
KCNQ2O43526 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ2O43526 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
KCNQ2O43526 AC098850.1-201ENST00000419919 790 ntBASIC21.52■■□□□ 1.04
KCNQ2O43526 AC234783.1-201ENST00000441761 496 ntBASIC21.52■■□□□ 1.04
KCNQ2O43526 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC21.52■■□□□ 1.04
KCNQ2O43526 RN7SL618P-201ENST00000477850 296 ntBASIC21.52■■□□□ 1.04
KCNQ2O43526 ELK1P1-201ENST00000485699 580 ntBASIC21.52■■□□□ 1.04
KCNQ2O43526 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC21.52■■□□□ 1.04
KCNQ2O43526 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.52■■□□□ 1.04
KCNQ2O43526 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.52■■□□□ 1.04
KCNQ2O43526 AC009113.1-201ENST00000570267 2443 ntBASIC21.52■■□□□ 1.04
KCNQ2O43526 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.52■■□□□ 1.04
KCNQ2O43526 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KCNQ2O43526 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
KCNQ2O43526 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
KCNQ2O43526 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
KCNQ2O43526 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
KCNQ2O43526 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
KCNQ2O43526 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNQ2O43526 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.51■■□□□ 1.03
KCNQ2O43526 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNQ2O43526 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNQ2O43526 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNQ2O43526 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNQ2O43526 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
KCNQ2O43526 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
KCNQ2O43526 AC114501.2-201ENST00000439631 535 ntBASIC21.51■■□□□ 1.03
KCNQ2O43526 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.51■■□□□ 1.03
KCNQ2O43526 BNIP3P42-201ENST00000454982 569 ntBASIC21.51■■□□□ 1.03
KCNQ2O43526 RNA5SP410-201ENST00000516285 106 ntBASIC21.51■■□□□ 1.03
KCNQ2O43526 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC21.51■■□□□ 1.03
KCNQ2O43526 RN7SL219P-201ENST00000582872 296 ntBASIC21.51■■□□□ 1.03
KCNQ2O43526 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms