Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.46■□□□□ 0.71
PRPF3O43395 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.46■□□□□ 0.71
PRPF3O43395 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.46■□□□□ 0.71
PRPF3O43395 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRPF3O43395 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.46■□□□□ 0.71
PRPF3O43395 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRPF3O43395 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.46■□□□□ 0.71
PRPF3O43395 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PRPF3O43395 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF3O43395 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.45■□□□□ 0.7
PRPF3O43395 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF3O43395 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.45■□□□□ 0.7
PRPF3O43395 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.45■□□□□ 0.7
PRPF3O43395 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PRPF3O43395 AL513480.1-201ENST00000451731 511 ntBASIC19.45■□□□□ 0.7
PRPF3O43395 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.45■□□□□ 0.7
PRPF3O43395 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.45■□□□□ 0.7
PRPF3O43395 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PRPF3O43395 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.45■□□□□ 0.7
PRPF3O43395 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.45■□□□□ 0.7
PRPF3O43395 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.45■□□□□ 0.7
PRPF3O43395 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.45■□□□□ 0.7
PRPF3O43395 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.45■□□□□ 0.7
PRPF3O43395 AC140113.2-201ENST00000604370 208 ntBASIC19.45■□□□□ 0.7
PRPF3O43395 AC027601.4-201ENST00000611259 610 ntBASIC19.45■□□□□ 0.7
PRPF3O43395 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF3O43395 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF3O43395 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF3O43395 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF3O43395 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.45■□□□□ 0.7
PRPF3O43395 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PRPF3O43395 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.45■□□□□ 0.7
PRPF3O43395 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.45■□□□□ 0.7
PRPF3O43395 AC012569.1-201ENST00000591191 1524 ntBASIC19.45■□□□□ 0.7
PRPF3O43395 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PRPF3O43395 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRPF3O43395 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRPF3O43395 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PRPF3O43395 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.44■□□□□ 0.7
PRPF3O43395 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPF3O43395 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PRPF3O43395 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPF3O43395 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPF3O43395 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.44■□□□□ 0.7
PRPF3O43395 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 AL591424.1-201ENST00000442569 1213 ntBASIC19.44■□□□□ 0.7
PRPF3O43395 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.44■□□□□ 0.7
PRPF3O43395 HLA-J-202ENST00000469281 1241 ntBASIC19.44■□□□□ 0.7
PRPF3O43395 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PRPF3O43395 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.44■□□□□ 0.7
PRPF3O43395 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.44■□□□□ 0.7
PRPF3O43395 FAM197Y3-203ENST00000618346 717 ntBASIC19.44■□□□□ 0.7
PRPF3O43395 AP001350.2-201ENST00000625104 1094 ntBASIC19.44■□□□□ 0.7
PRPF3O43395 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.44■□□□□ 0.7
PRPF3O43395 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.44■□□□□ 0.7
PRPF3O43395 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PRPF3O43395 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRPF3O43395 AC006538.1-201ENST00000567905 1585 ntBASIC19.44■□□□□ 0.7
PRPF3O43395 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.43■□□□□ 0.7
PRPF3O43395 AL671710.1-201ENST00000610245 2349 ntBASIC19.43■□□□□ 0.7
PRPF3O43395 HLA-A-202ENST00000376806 1854 ntBASIC19.43■□□□□ 0.7
PRPF3O43395 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF3O43395 KRT8P39-201ENST00000396270 1433 ntBASIC19.43■□□□□ 0.7
PRPF3O43395 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
PRPF3O43395 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF3O43395 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF3O43395 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF3O43395 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PRPF3O43395 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF3O43395 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF3O43395 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF3O43395 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF3O43395 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF3O43395 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRPF3O43395 AL022342.1-201ENST00000400363 863 ntBASIC19.43■□□□□ 0.7
PRPF3O43395 HMGA1P7-201ENST00000406908 502 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms