Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NDUFS4O43181 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFS4O43181 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.23■□□□□ 0.19
NDUFS4O43181 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.23■□□□□ 0.19
NDUFS4O43181 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
NDUFS4O43181 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.23■□□□□ 0.19
NDUFS4O43181 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.23■□□□□ 0.19
NDUFS4O43181 RPL13AP23-201ENST00000480739 586 ntBASIC16.23■□□□□ 0.19
NDUFS4O43181 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.23■□□□□ 0.19
NDUFS4O43181 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NDUFS4O43181 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NDUFS4O43181 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
NDUFS4O43181 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.23■□□□□ 0.19
NDUFS4O43181 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NDUFS4O43181 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.22■□□□□ 0.19
NDUFS4O43181 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.22■□□□□ 0.19
NDUFS4O43181 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.22■□□□□ 0.19
NDUFS4O43181 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NDUFS4O43181 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.22■□□□□ 0.19
NDUFS4O43181 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFS4O43181 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFS4O43181 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NDUFS4O43181 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.22■□□□□ 0.19
NDUFS4O43181 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.22■□□□□ 0.19
NDUFS4O43181 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFS4O43181 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NDUFS4O43181 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.22■□□□□ 0.19
NDUFS4O43181 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.22■□□□□ 0.19
NDUFS4O43181 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFS4O43181 AC010654.1-201ENST00000615722 808 ntBASIC16.22■□□□□ 0.19
NDUFS4O43181 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
NDUFS4O43181 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.22■□□□□ 0.19
NDUFS4O43181 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFS4O43181 PCDHB17P-201ENST00000539533 2393 ntBASIC16.22■□□□□ 0.19
NDUFS4O43181 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
NDUFS4O43181 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NDUFS4O43181 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.22■□□□□ 0.19
NDUFS4O43181 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.22■□□□□ 0.19
NDUFS4O43181 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NDUFS4O43181 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NDUFS4O43181 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.21■□□□□ 0.19
NDUFS4O43181 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
NDUFS4O43181 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS4O43181 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS4O43181 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 SLC25A1P1-201ENST00000528351 927 ntBASIC16.21■□□□□ 0.19
NDUFS4O43181 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.21■□□□□ 0.19
NDUFS4O43181 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
NDUFS4O43181 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.21■□□□□ 0.19
NDUFS4O43181 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.21■□□□□ 0.19
NDUFS4O43181 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.21■□□□□ 0.19
NDUFS4O43181 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NDUFS4O43181 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NDUFS4O43181 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NDUFS4O43181 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms