Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TLR4O00206 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.78■□□□□ 0.28
TLR4O00206 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.78■□□□□ 0.28
TLR4O00206 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TLR4O00206 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR4O00206 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.78■□□□□ 0.28
TLR4O00206 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.78■□□□□ 0.28
TLR4O00206 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.78■□□□□ 0.28
TLR4O00206 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.78■□□□□ 0.28
TLR4O00206 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.78■□□□□ 0.28
TLR4O00206 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.78■□□□□ 0.28
TLR4O00206 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
TLR4O00206 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TLR4O00206 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.78■□□□□ 0.28
TLR4O00206 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TLR4O00206 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TLR4O00206 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.77■□□□□ 0.28
TLR4O00206 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.77■□□□□ 0.28
TLR4O00206 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.77■□□□□ 0.28
TLR4O00206 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TLR4O00206 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.77■□□□□ 0.28
TLR4O00206 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TLR4O00206 AL627223.1-201ENST00000416693 442 ntBASIC16.77■□□□□ 0.28
TLR4O00206 AC005237.2-201ENST00000434368 219 ntBASIC16.77■□□□□ 0.28
TLR4O00206 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.77■□□□□ 0.28
TLR4O00206 KRT8P48-201ENST00000515599 1220 ntBASIC16.77■□□□□ 0.28
TLR4O00206 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.77■□□□□ 0.28
TLR4O00206 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.77■□□□□ 0.28
TLR4O00206 AC093520.2-201ENST00000561830 333 ntBASIC16.77■□□□□ 0.28
TLR4O00206 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
TLR4O00206 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.77■□□□□ 0.28
TLR4O00206 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.77■□□□□ 0.28
TLR4O00206 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TLR4O00206 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.77■□□□□ 0.28
TLR4O00206 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TLR4O00206 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TLR4O00206 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TLR4O00206 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TLR4O00206 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TLR4O00206 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TLR4O00206 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TLR4O00206 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TLR4O00206 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 TFAMP1-201ENST00000412727 736 ntBASIC16.76■□□□□ 0.27
TLR4O00206 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.76■□□□□ 0.27
TLR4O00206 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.76■□□□□ 0.27
TLR4O00206 AC005412.3-201ENST00000580309 715 ntBASIC16.76■□□□□ 0.27
TLR4O00206 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TLR4O00206 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.76■□□□□ 0.27
TLR4O00206 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TLR4O00206 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.76■□□□□ 0.27
TLR4O00206 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TLR4O00206 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms