Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 GMCL1P1-201ENST00000463439 1581 ntBASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 MARS-233ENST00000628866 2583 ntTSL 5 BASIC9.4□□□□□ -0.9
CHKB-CPT1BH3BT56 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CHKB-CPT1BH3BT56 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 AC239859.2-201ENST00000444165 318 ntBASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 NME1-207ENST00000480143 964 ntTSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 CPT2-209ENST00000636935 803 ntTSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 AL365203.3-201ENST00000609742 2057 ntBASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHKB-CPT1BH3BT56 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
CHKB-CPT1BH3BT56 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC9.38□□□□□ -0.91
CHKB-CPT1BH3BT56 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHKB-CPT1BH3BT56 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
CHKB-CPT1BH3BT56 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHKB-CPT1BH3BT56 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHKB-CPT1BH3BT56 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
CHKB-CPT1BH3BT56 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHKB-CPT1BH3BT56 GAS2L1P2-201ENST00000436355 1356 ntBASIC9.38□□□□□ -0.91
CHKB-CPT1BH3BT56 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CHKB-CPT1BH3BT56 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms