Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
PCDHGB1Q9Y5G3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHGB1Q9Y5G3 AC044849.2-201ENST00000606596 710 ntBASIC21.93■■□□□ 1.1
PCDHGB1Q9Y5G3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB1Q9Y5G3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB1Q9Y5G3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB1Q9Y5G3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGB1Q9Y5G3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHGB1Q9Y5G3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB1Q9Y5G3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PCDHGB1Q9Y5G3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCDHGB1Q9Y5G3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGB1Q9Y5G3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGB1Q9Y5G3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHGB1Q9Y5G3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGB1Q9Y5G3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
PCDHGB1Q9Y5G3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PCDHGB1Q9Y5G3 AC097639.1-201ENST00000565519 1891 ntBASIC21.9■■□□□ 1.1
PCDHGB1Q9Y5G3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PCDHGB1Q9Y5G3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDHGB1Q9Y5G3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHGB1Q9Y5G3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
PCDHGB1Q9Y5G3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGB1Q9Y5G3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGB1Q9Y5G3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGB1Q9Y5G3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGB1Q9Y5G3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGB1Q9Y5G3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHGB1Q9Y5G3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PCDHGB1Q9Y5G3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGB1Q9Y5G3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB1Q9Y5G3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB1Q9Y5G3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB1Q9Y5G3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB1Q9Y5G3 LINC01124-201ENST00000409786 2117 ntBASIC21.88■■□□□ 1.09
PCDHGB1Q9Y5G3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB1Q9Y5G3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB1Q9Y5G3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB1Q9Y5G3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB1Q9Y5G3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB1Q9Y5G3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGB1Q9Y5G3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGB1Q9Y5G3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB1Q9Y5G3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB1Q9Y5G3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGB1Q9Y5G3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.85■■□□□ 1.09
PCDHGB1Q9Y5G3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
PCDHGB1Q9Y5G3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PCDHGB1Q9Y5G3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB1Q9Y5G3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB1Q9Y5G3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB1Q9Y5G3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB1Q9Y5G3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB1Q9Y5G3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB1Q9Y5G3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB1Q9Y5G3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB1Q9Y5G3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHGB1Q9Y5G3 AC096887.2-201ENST00000623443 1957 ntBASIC21.83■■□□□ 1.09
PCDHGB1Q9Y5G3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB1Q9Y5G3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB1Q9Y5G3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB1Q9Y5G3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGB1Q9Y5G3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDHGB1Q9Y5G3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGB1Q9Y5G3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHGB1Q9Y5G3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGB1Q9Y5G3 AP003733.4-201ENST00000623785 1697 ntBASIC21.82■■□□□ 1.08
PCDHGB1Q9Y5G3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGB1Q9Y5G3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PCDHGB1Q9Y5G3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGB1Q9Y5G3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHGB1Q9Y5G3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGB1Q9Y5G3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHGB1Q9Y5G3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB1Q9Y5G3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB1Q9Y5G3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PCDHGB1Q9Y5G3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB1Q9Y5G3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGB1Q9Y5G3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB1Q9Y5G3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB1Q9Y5G3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB1Q9Y5G3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB1Q9Y5G3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB1Q9Y5G3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB1Q9Y5G3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB1Q9Y5G3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB1Q9Y5G3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHGB1Q9Y5G3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB1Q9Y5G3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB1Q9Y5G3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB1Q9Y5G3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB1Q9Y5G3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB1Q9Y5G3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB1Q9Y5G3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGB1Q9Y5G3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHGB1Q9Y5G3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHGB1Q9Y5G3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB1Q9Y5G3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHGB1Q9Y5G3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHGB1Q9Y5G3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms