Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 DUSP8P4-201ENST00000399538 1761 ntBASIC27.18■■□□□ 1.94
KDM3AQ9Y4C1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
KDM3AQ9Y4C1 DUX4L9-201ENST00000449051 1259 ntBASIC27.17■■□□□ 1.94
KDM3AQ9Y4C1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
KDM3AQ9Y4C1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
KDM3AQ9Y4C1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
KDM3AQ9Y4C1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
KDM3AQ9Y4C1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
KDM3AQ9Y4C1 RARRES2P1-201ENST00000474487 481 ntBASIC27.16■■□□□ 1.94
KDM3AQ9Y4C1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
KDM3AQ9Y4C1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
KDM3AQ9Y4C1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
KDM3AQ9Y4C1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
KDM3AQ9Y4C1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.16■■□□□ 1.94
KDM3AQ9Y4C1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
KDM3AQ9Y4C1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
KDM3AQ9Y4C1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.15■■□□□ 1.94
KDM3AQ9Y4C1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.15■■□□□ 1.94
KDM3AQ9Y4C1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
KDM3AQ9Y4C1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.14■■□□□ 1.94
KDM3AQ9Y4C1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
KDM3AQ9Y4C1 SPCS2P3-201ENST00000500401 656 ntBASIC27.14■■□□□ 1.93
KDM3AQ9Y4C1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.14■■□□□ 1.93
KDM3AQ9Y4C1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
KDM3AQ9Y4C1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KDM3AQ9Y4C1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.13■■□□□ 1.93
KDM3AQ9Y4C1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KDM3AQ9Y4C1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
KDM3AQ9Y4C1 AC010501.1-201ENST00000606270 1962 ntBASIC27.13■■□□□ 1.93
KDM3AQ9Y4C1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
KDM3AQ9Y4C1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.13■■□□□ 1.93
KDM3AQ9Y4C1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
KDM3AQ9Y4C1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KDM3AQ9Y4C1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
KDM3AQ9Y4C1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
KDM3AQ9Y4C1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
KDM3AQ9Y4C1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
KDM3AQ9Y4C1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.11■■□□□ 1.93
KDM3AQ9Y4C1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
KDM3AQ9Y4C1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
KDM3AQ9Y4C1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.1■■□□□ 1.93
KDM3AQ9Y4C1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
KDM3AQ9Y4C1 ERN1-208ENST00000606895 2068 ntBASIC27.1■■□□□ 1.93
KDM3AQ9Y4C1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
KDM3AQ9Y4C1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
KDM3AQ9Y4C1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
KDM3AQ9Y4C1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.09■■□□□ 1.93
KDM3AQ9Y4C1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
KDM3AQ9Y4C1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
KDM3AQ9Y4C1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
KDM3AQ9Y4C1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
KDM3AQ9Y4C1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
KDM3AQ9Y4C1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.07■■□□□ 1.92
KDM3AQ9Y4C1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.07■■□□□ 1.92
KDM3AQ9Y4C1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.07■■□□□ 1.92
KDM3AQ9Y4C1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
KDM3AQ9Y4C1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.07■■□□□ 1.92
KDM3AQ9Y4C1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.07■■□□□ 1.92
KDM3AQ9Y4C1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.07■■□□□ 1.92
KDM3AQ9Y4C1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
KDM3AQ9Y4C1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
KDM3AQ9Y4C1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
KDM3AQ9Y4C1 MIR6765-201ENST00000614092 87 ntBASIC27.05■■□□□ 1.92
KDM3AQ9Y4C1 AC074183.2-201ENST00000623112 922 ntBASIC27.05■■□□□ 1.92
KDM3AQ9Y4C1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
KDM3AQ9Y4C1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
KDM3AQ9Y4C1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
KDM3AQ9Y4C1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
KDM3AQ9Y4C1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.04■■□□□ 1.92
KDM3AQ9Y4C1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
KDM3AQ9Y4C1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.03■■□□□ 1.92
KDM3AQ9Y4C1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
KDM3AQ9Y4C1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.03■■□□□ 1.92
KDM3AQ9Y4C1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
KDM3AQ9Y4C1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.02■■□□□ 1.92
KDM3AQ9Y4C1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
KDM3AQ9Y4C1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
KDM3AQ9Y4C1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
KDM3AQ9Y4C1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
KDM3AQ9Y4C1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
KDM3AQ9Y4C1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.01■■□□□ 1.91
KDM3AQ9Y4C1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
KDM3AQ9Y4C1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.01■■□□□ 1.91
KDM3AQ9Y4C1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
KDM3AQ9Y4C1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27■■□□□ 1.91
KDM3AQ9Y4C1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
KDM3AQ9Y4C1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC27■■□□□ 1.91
KDM3AQ9Y4C1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
KDM3AQ9Y4C1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms