Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHGB4Q9UN71 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB4Q9UN71 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHGB4Q9UN71 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHGB4Q9UN71 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB4Q9UN71 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB4Q9UN71 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB4Q9UN71 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB4Q9UN71 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.1■■□□□ 1.29
PCDHGB4Q9UN71 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGB4Q9UN71 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB4Q9UN71 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB4Q9UN71 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB4Q9UN71 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB4Q9UN71 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB4Q9UN71 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHGB4Q9UN71 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB4Q9UN71 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB4Q9UN71 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHGB4Q9UN71 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB4Q9UN71 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB4Q9UN71 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB4Q9UN71 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB4Q9UN71 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB4Q9UN71 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGB4Q9UN71 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGB4Q9UN71 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGB4Q9UN71 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDHGB4Q9UN71 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHGB4Q9UN71 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB4Q9UN71 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB4Q9UN71 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHGB4Q9UN71 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB4Q9UN71 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB4Q9UN71 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB4Q9UN71 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 HLA-V-202ENST00000446817 847 ntBASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 AL359258.2-201ENST00000564063 1566 ntBASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGB4Q9UN71 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGB4Q9UN71 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
PCDHGB4Q9UN71 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGB4Q9UN71 ABHD17AP4-201ENST00000411545 909 ntBASIC23.04■■□□□ 1.28
PCDHGB4Q9UN71 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHGB4Q9UN71 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHGB4Q9UN71 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHGB4Q9UN71 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGB4Q9UN71 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGB4Q9UN71 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDHGB4Q9UN71 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHGB4Q9UN71 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGB4Q9UN71 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGB4Q9UN71 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGB4Q9UN71 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHGB4Q9UN71 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB4Q9UN71 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB4Q9UN71 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
PCDHGB4Q9UN71 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
PCDHGB4Q9UN71 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB4Q9UN71 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGB4Q9UN71 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHGB4Q9UN71 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGB4Q9UN71 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGB4Q9UN71 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHGB4Q9UN71 AC010501.1-201ENST00000606270 1962 ntBASIC22.99■■□□□ 1.27
PCDHGB4Q9UN71 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
PCDHGB4Q9UN71 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGB4Q9UN71 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PCDHGB4Q9UN71 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PCDHGB4Q9UN71 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGB4Q9UN71 AC126177.7-201ENST00000547904 679 ntBASIC22.98■■□□□ 1.27
PCDHGB4Q9UN71 CR559946.2-201ENST00000623684 991 ntBASIC22.98■■□□□ 1.27
PCDHGB4Q9UN71 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGB4Q9UN71 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGB4Q9UN71 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHGB4Q9UN71 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PCDHGB4Q9UN71 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms