Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TLR9Q9NR96 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
TLR9Q9NR96 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.78■■□□□ 1.72
TLR9Q9NR96 KRT18P24-201ENST00000344739 1156 ntBASIC25.78■■□□□ 1.72
TLR9Q9NR96 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TLR9Q9NR96 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.78■■□□□ 1.72
TLR9Q9NR96 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TLR9Q9NR96 AL449106.1-201ENST00000608517 1980 ntBASIC25.77■■□□□ 1.72
TLR9Q9NR96 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TLR9Q9NR96 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TLR9Q9NR96 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.77■■□□□ 1.72
TLR9Q9NR96 KRT16P3-201ENST00000439127 1283 ntBASIC25.77■■□□□ 1.72
TLR9Q9NR96 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.77■■□□□ 1.72
TLR9Q9NR96 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.77■■□□□ 1.72
TLR9Q9NR96 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TLR9Q9NR96 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.76■■□□□ 1.71
TLR9Q9NR96 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TLR9Q9NR96 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TLR9Q9NR96 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.75■■□□□ 1.71
TLR9Q9NR96 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TLR9Q9NR96 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
TLR9Q9NR96 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
TLR9Q9NR96 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.74■■□□□ 1.71
TLR9Q9NR96 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.74■■□□□ 1.71
TLR9Q9NR96 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.74■■□□□ 1.71
TLR9Q9NR96 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TLR9Q9NR96 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.73■■□□□ 1.71
TLR9Q9NR96 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.73■■□□□ 1.71
TLR9Q9NR96 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
TLR9Q9NR96 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TLR9Q9NR96 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TLR9Q9NR96 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TLR9Q9NR96 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
TLR9Q9NR96 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TLR9Q9NR96 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TLR9Q9NR96 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.71■■□□□ 1.71
TLR9Q9NR96 AC137630.3-201ENST00000607245 391 ntBASIC25.71■■□□□ 1.71
TLR9Q9NR96 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.71■■□□□ 1.71
TLR9Q9NR96 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
TLR9Q9NR96 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
TLR9Q9NR96 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
TLR9Q9NR96 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
TLR9Q9NR96 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
TLR9Q9NR96 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
TLR9Q9NR96 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TLR9Q9NR96 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
TLR9Q9NR96 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TLR9Q9NR96 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TLR9Q9NR96 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.69■■□□□ 1.7
TLR9Q9NR96 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.68■■□□□ 1.7
TLR9Q9NR96 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TLR9Q9NR96 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.68■■□□□ 1.7
TLR9Q9NR96 TSPY9P-201ENST00000440215 945 ntBASIC25.68■■□□□ 1.7
TLR9Q9NR96 TSPY11P-201ENST00000442607 1045 ntBASIC25.68■■□□□ 1.7
TLR9Q9NR96 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.68■■□□□ 1.7
TLR9Q9NR96 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.68■■□□□ 1.7
TLR9Q9NR96 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TLR9Q9NR96 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
TLR9Q9NR96 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TLR9Q9NR96 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.67■■□□□ 1.7
TLR9Q9NR96 AC120024.1-201ENST00000562672 995 ntBASIC25.67■■□□□ 1.7
TLR9Q9NR96 AC021242.3-201ENST00000607598 1377 ntBASIC25.67■■□□□ 1.7
TLR9Q9NR96 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
TLR9Q9NR96 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
TLR9Q9NR96 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TLR9Q9NR96 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TLR9Q9NR96 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
TLR9Q9NR96 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TLR9Q9NR96 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.65■■□□□ 1.7
TLR9Q9NR96 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
TLR9Q9NR96 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.65■■□□□ 1.7
TLR9Q9NR96 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
TLR9Q9NR96 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TLR9Q9NR96 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TLR9Q9NR96 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TLR9Q9NR96 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
TLR9Q9NR96 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TLR9Q9NR96 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
TLR9Q9NR96 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.64■■□□□ 1.7
TLR9Q9NR96 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TLR9Q9NR96 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TLR9Q9NR96 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TLR9Q9NR96 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TLR9Q9NR96 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.64■■□□□ 1.7
TLR9Q9NR96 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TLR9Q9NR96 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.64■■□□□ 1.7
TLR9Q9NR96 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.64■■□□□ 1.7
TLR9Q9NR96 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TLR9Q9NR96 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.63■■□□□ 1.69
TLR9Q9NR96 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TLR9Q9NR96 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TLR9Q9NR96 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TLR9Q9NR96 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.62■■□□□ 1.69
TLR9Q9NR96 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.62■■□□□ 1.69
TLR9Q9NR96 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TLR9Q9NR96 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.61■■□□□ 1.69
TLR9Q9NR96 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TLR9Q9NR96 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.61■■□□□ 1.69
TLR9Q9NR96 DRD5P2-201ENST00000421395 2012 ntBASIC25.61■■□□□ 1.69
TLR9Q9NR96 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms