Protein–RNA interactions for Protein: Q9HD33

MRPL47, 39S ribosomal protein L47, mitochondrial, humanhuman

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47Q9HD33 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.34■■□□□ 1.65
MRPL47Q9HD33 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
MRPL47Q9HD33 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
MRPL47Q9HD33 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
MRPL47Q9HD33 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
MRPL47Q9HD33 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.34■■□□□ 1.65
MRPL47Q9HD33 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.34■■□□□ 1.65
MRPL47Q9HD33 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
MRPL47Q9HD33 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
MRPL47Q9HD33 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
MRPL47Q9HD33 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
MRPL47Q9HD33 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.33■■□□□ 1.65
MRPL47Q9HD33 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
MRPL47Q9HD33 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
MRPL47Q9HD33 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
MRPL47Q9HD33 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
MRPL47Q9HD33 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
MRPL47Q9HD33 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.31■■□□□ 1.64
MRPL47Q9HD33 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
MRPL47Q9HD33 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MRPL47Q9HD33 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.31■■□□□ 1.64
MRPL47Q9HD33 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.31■■□□□ 1.64
MRPL47Q9HD33 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
MRPL47Q9HD33 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.3■■□□□ 1.64
MRPL47Q9HD33 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.3■■□□□ 1.64
MRPL47Q9HD33 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.3■■□□□ 1.64
MRPL47Q9HD33 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
MRPL47Q9HD33 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
MRPL47Q9HD33 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
MRPL47Q9HD33 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
MRPL47Q9HD33 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
MRPL47Q9HD33 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
MRPL47Q9HD33 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
MRPL47Q9HD33 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.29■■□□□ 1.64
MRPL47Q9HD33 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
MRPL47Q9HD33 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.29■■□□□ 1.64
MRPL47Q9HD33 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
MRPL47Q9HD33 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
MRPL47Q9HD33 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
MRPL47Q9HD33 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
MRPL47Q9HD33 RP9P-202ENST00000450133 1212 ntBASIC25.28■■□□□ 1.64
MRPL47Q9HD33 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.28■■□□□ 1.64
MRPL47Q9HD33 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MRPL47Q9HD33 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
MRPL47Q9HD33 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MRPL47Q9HD33 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
MRPL47Q9HD33 AC097639.1-201ENST00000565519 1891 ntBASIC25.27■■□□□ 1.64
MRPL47Q9HD33 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.27■■□□□ 1.64
MRPL47Q9HD33 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.27■■□□□ 1.64
MRPL47Q9HD33 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MRPL47Q9HD33 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MRPL47Q9HD33 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MRPL47Q9HD33 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MRPL47Q9HD33 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MRPL47Q9HD33 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
MRPL47Q9HD33 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.25■■□□□ 1.63
MRPL47Q9HD33 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.25■■□□□ 1.63
MRPL47Q9HD33 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
MRPL47Q9HD33 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
MRPL47Q9HD33 AC142381.3-201ENST00000568208 1670 ntBASIC25.24■■□□□ 1.63
MRPL47Q9HD33 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MRPL47Q9HD33 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MRPL47Q9HD33 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.24■■□□□ 1.63
MRPL47Q9HD33 GPX1-201ENST00000419349 1106 ntBASIC25.24■■□□□ 1.63
MRPL47Q9HD33 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
MRPL47Q9HD33 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MRPL47Q9HD33 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MRPL47Q9HD33 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
MRPL47Q9HD33 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.23■■□□□ 1.63
MRPL47Q9HD33 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
MRPL47Q9HD33 AC135731.1-201ENST00000569415 2548 ntBASIC25.23■■□□□ 1.63
MRPL47Q9HD33 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.22■■□□□ 1.63
MRPL47Q9HD33 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MRPL47Q9HD33 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
MRPL47Q9HD33 AC007029.1-201ENST00000604183 313 ntBASIC25.22■■□□□ 1.63
MRPL47Q9HD33 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
MRPL47Q9HD33 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MRPL47Q9HD33 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MRPL47Q9HD33 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
MRPL47Q9HD33 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
MRPL47Q9HD33 AC022211.4-201ENST00000625094 2161 ntBASIC25.21■■□□□ 1.63
MRPL47Q9HD33 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
MRPL47Q9HD33 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.21■■□□□ 1.63
MRPL47Q9HD33 AC093536.1-201ENST00000569153 554 ntBASIC25.21■■□□□ 1.63
MRPL47Q9HD33 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.21■■□□□ 1.63
MRPL47Q9HD33 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
MRPL47Q9HD33 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MRPL47Q9HD33 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MRPL47Q9HD33 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
MRPL47Q9HD33 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
MRPL47Q9HD33 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
MRPL47Q9HD33 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MRPL47Q9HD33 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MRPL47Q9HD33 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MRPL47Q9HD33 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MRPL47Q9HD33 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.19■■□□□ 1.62
MRPL47Q9HD33 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
MRPL47Q9HD33 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MRPL47Q9HD33 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MRPL47Q9HD33 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms