Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
RNF41Q9H4P4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.48■■■□□ 2.15
RNF41Q9H4P4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.48■■■□□ 2.15
RNF41Q9H4P4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.48■■■□□ 2.15
RNF41Q9H4P4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RNF41Q9H4P4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RNF41Q9H4P4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.47■■■□□ 2.15
RNF41Q9H4P4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC28.47■■■□□ 2.15
RNF41Q9H4P4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.47■■■□□ 2.15
RNF41Q9H4P4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RNF41Q9H4P4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.47■■■□□ 2.15
RNF41Q9H4P4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.46■■■□□ 2.15
RNF41Q9H4P4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.46■■■□□ 2.15
RNF41Q9H4P4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RNF41Q9H4P4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RNF41Q9H4P4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
RNF41Q9H4P4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
RNF41Q9H4P4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.45■■■□□ 2.15
RNF41Q9H4P4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
RNF41Q9H4P4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
RNF41Q9H4P4 AC010501.1-201ENST00000606270 1962 ntBASIC28.45■■■□□ 2.14
RNF41Q9H4P4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
RNF41Q9H4P4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.45■■■□□ 2.14
RNF41Q9H4P4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
RNF41Q9H4P4 ERN1-208ENST00000606895 2068 ntBASIC28.45■■■□□ 2.14
RNF41Q9H4P4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
RNF41Q9H4P4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
RNF41Q9H4P4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNF41Q9H4P4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.44■■■□□ 2.14
RNF41Q9H4P4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNF41Q9H4P4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNF41Q9H4P4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNF41Q9H4P4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC28.44■■■□□ 2.14
RNF41Q9H4P4 DUX4L18-201ENST00000553347 1267 ntBASIC28.44■■■□□ 2.14
RNF41Q9H4P4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC28.44■■■□□ 2.14
RNF41Q9H4P4 AC091060.1-201ENST00000623524 1766 ntBASIC28.44■■■□□ 2.14
RNF41Q9H4P4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RNF41Q9H4P4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RNF41Q9H4P4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.43■■■□□ 2.14
RNF41Q9H4P4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.43■■■□□ 2.14
RNF41Q9H4P4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.43■■■□□ 2.14
RNF41Q9H4P4 AL033527.3-201ENST00000566366 1196 ntBASIC28.42■■■□□ 2.14
RNF41Q9H4P4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RNF41Q9H4P4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC28.41■■■□□ 2.14
RNF41Q9H4P4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.41■■■□□ 2.14
RNF41Q9H4P4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RNF41Q9H4P4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
RNF41Q9H4P4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
RNF41Q9H4P4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RNF41Q9H4P4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.4■■■□□ 2.14
RNF41Q9H4P4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RNF41Q9H4P4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RNF41Q9H4P4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
RNF41Q9H4P4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
RNF41Q9H4P4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.4■■■□□ 2.14
RNF41Q9H4P4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.39■■■□□ 2.14
RNF41Q9H4P4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
RNF41Q9H4P4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.39■■■□□ 2.14
RNF41Q9H4P4 AC145676.1-201ENST00000514988 2004 ntBASIC28.39■■■□□ 2.14
RNF41Q9H4P4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
RNF41Q9H4P4 DUSP8P4-201ENST00000399538 1761 ntBASIC28.39■■■□□ 2.13
RNF41Q9H4P4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
RNF41Q9H4P4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
RNF41Q9H4P4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF41Q9H4P4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.37■■■□□ 2.13
RNF41Q9H4P4 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.37■■■□□ 2.13
RNF41Q9H4P4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.37■■■□□ 2.13
RNF41Q9H4P4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC28.37■■■□□ 2.13
RNF41Q9H4P4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF41Q9H4P4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.37■■■□□ 2.13
RNF41Q9H4P4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
RNF41Q9H4P4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
RNF41Q9H4P4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF41Q9H4P4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
RNF41Q9H4P4 RPS2P7-201ENST00000447334 885 ntBASIC28.36■■■□□ 2.13
RNF41Q9H4P4 AC096887.2-201ENST00000623443 1957 ntBASIC28.36■■■□□ 2.13
RNF41Q9H4P4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
RNF41Q9H4P4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.36■■■□□ 2.13
RNF41Q9H4P4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
RNF41Q9H4P4 AC087393.1-201ENST00000582896 145 ntBASIC28.35■■■□□ 2.13
RNF41Q9H4P4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF41Q9H4P4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.34■■■□□ 2.13
RNF41Q9H4P4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RNF41Q9H4P4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RNF41Q9H4P4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RNF41Q9H4P4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.33■■■□□ 2.13
RNF41Q9H4P4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
RNF41Q9H4P4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.33■■■□□ 2.13
RNF41Q9H4P4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC28.33■■■□□ 2.13
RNF41Q9H4P4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.12
RNF41Q9H4P4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
RNF41Q9H4P4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RNF41Q9H4P4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.32■■■□□ 2.12
RNF41Q9H4P4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
RNF41Q9H4P4 AC139795.1-202ENST00000500444 432 ntBASIC28.32■■■□□ 2.12
RNF41Q9H4P4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
RNF41Q9H4P4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.32■■■□□ 2.12
RNF41Q9H4P4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RNF41Q9H4P4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
RNF41Q9H4P4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.31■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms