Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDH23Q9H251 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDH23Q9H251 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDH23Q9H251 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDH23Q9H251 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDH23Q9H251 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.08■■□□□ 1.77
CDH23Q9H251 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDH23Q9H251 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.08■■□□□ 1.76
CDH23Q9H251 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDH23Q9H251 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.07■■□□□ 1.76
CDH23Q9H251 AC106739.1-201ENST00000617035 715 ntBASIC26.07■■□□□ 1.76
CDH23Q9H251 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.06■■□□□ 1.76
CDH23Q9H251 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.06■■□□□ 1.76
CDH23Q9H251 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDH23Q9H251 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
CDH23Q9H251 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.06■■□□□ 1.76
CDH23Q9H251 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDH23Q9H251 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDH23Q9H251 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.05■■□□□ 1.76
CDH23Q9H251 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
CDH23Q9H251 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.05■■□□□ 1.76
CDH23Q9H251 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.05■■□□□ 1.76
CDH23Q9H251 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.04■■□□□ 1.76
CDH23Q9H251 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CDH23Q9H251 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CDH23Q9H251 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.03■■□□□ 1.76
CDH23Q9H251 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.03■■□□□ 1.76
CDH23Q9H251 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDH23Q9H251 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.03■■□□□ 1.76
CDH23Q9H251 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
CDH23Q9H251 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDH23Q9H251 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CDH23Q9H251 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDH23Q9H251 KRT18P24-201ENST00000344739 1156 ntBASIC26.01■■□□□ 1.75
CDH23Q9H251 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CDH23Q9H251 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CDH23Q9H251 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CDH23Q9H251 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDH23Q9H251 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26■■□□□ 1.75
CDH23Q9H251 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDH23Q9H251 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
CDH23Q9H251 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDH23Q9H251 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.99■■□□□ 1.75
CDH23Q9H251 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDH23Q9H251 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
CDH23Q9H251 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDH23Q9H251 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.99■■□□□ 1.75
CDH23Q9H251 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.98■■□□□ 1.75
CDH23Q9H251 AP004833.2-201ENST00000532228 1454 ntBASIC25.98■■□□□ 1.75
CDH23Q9H251 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDH23Q9H251 WHAMMP3-201ENST00000611636 1609 ntBASIC25.98■■□□□ 1.75
CDH23Q9H251 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDH23Q9H251 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.98■■□□□ 1.75
CDH23Q9H251 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDH23Q9H251 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDH23Q9H251 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
CDH23Q9H251 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDH23Q9H251 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
CDH23Q9H251 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
CDH23Q9H251 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CDH23Q9H251 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.96■■□□□ 1.75
CDH23Q9H251 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.96■■□□□ 1.75
CDH23Q9H251 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CDH23Q9H251 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.96■■□□□ 1.75
CDH23Q9H251 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.96■■□□□ 1.75
CDH23Q9H251 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
CDH23Q9H251 MIR6821-201ENST00000617625 74 ntBASIC25.96■■□□□ 1.75
CDH23Q9H251 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
CDH23Q9H251 AC090192.1-201ENST00000517740 490 ntBASIC25.95■■□□□ 1.75
CDH23Q9H251 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
CDH23Q9H251 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.95■■□□□ 1.74
CDH23Q9H251 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
CDH23Q9H251 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDH23Q9H251 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.94■■□□□ 1.74
CDH23Q9H251 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.94■■□□□ 1.74
CDH23Q9H251 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDH23Q9H251 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDH23Q9H251 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.94■■□□□ 1.74
CDH23Q9H251 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDH23Q9H251 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
CDH23Q9H251 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.92■■□□□ 1.74
CDH23Q9H251 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.91■■□□□ 1.74
CDH23Q9H251 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
CDH23Q9H251 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDH23Q9H251 AL162430.1-201ENST00000480705 870 ntBASIC25.91■■□□□ 1.74
CDH23Q9H251 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.91■■□□□ 1.74
CDH23Q9H251 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
CDH23Q9H251 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDH23Q9H251 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDH23Q9H251 AC097381.1-201ENST00000429019 1296 ntBASIC25.9■■□□□ 1.74
CDH23Q9H251 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDH23Q9H251 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDH23Q9H251 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.9■■□□□ 1.74
CDH23Q9H251 AC142381.2-201ENST00000566120 298 ntBASIC25.9■■□□□ 1.74
CDH23Q9H251 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDH23Q9H251 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CDH23Q9H251 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.89■■□□□ 1.74
CDH23Q9H251 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CDH23Q9H251 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CDH23Q9H251 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms