Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
SPENQ96T58 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SPENQ96T58 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22■■□□□ 1.11
SPENQ96T58 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SPENQ96T58 AC022616.5-201ENST00000518796 181 ntBASIC22■■□□□ 1.11
SPENQ96T58 KRT125P-201ENST00000546827 989 ntBASIC22■■□□□ 1.11
SPENQ96T58 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22■■□□□ 1.11
SPENQ96T58 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22■■□□□ 1.11
SPENQ96T58 DRD5P2-201ENST00000421395 2012 ntBASIC22■■□□□ 1.11
SPENQ96T58 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SPENQ96T58 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPENQ96T58 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22■■□□□ 1.11
SPENQ96T58 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.99■■□□□ 1.11
SPENQ96T58 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPENQ96T58 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPENQ96T58 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
SPENQ96T58 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SPENQ96T58 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.99■■□□□ 1.11
SPENQ96T58 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.99■■□□□ 1.11
SPENQ96T58 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SPENQ96T58 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.99■■□□□ 1.11
SPENQ96T58 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SPENQ96T58 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SPENQ96T58 MIR4466-201ENST00000606121 54 ntBASIC21.99■■□□□ 1.11
SPENQ96T58 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPENQ96T58 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPENQ96T58 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPENQ96T58 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SPENQ96T58 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPENQ96T58 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SPENQ96T58 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPENQ96T58 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPENQ96T58 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPENQ96T58 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SPENQ96T58 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SPENQ96T58 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.98■■□□□ 1.11
SPENQ96T58 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPENQ96T58 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPENQ96T58 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SPENQ96T58 AL117332.1-201ENST00000622628 974 ntBASIC21.97■■□□□ 1.11
SPENQ96T58 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SPENQ96T58 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SPENQ96T58 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SPENQ96T58 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.97■■□□□ 1.11
SPENQ96T58 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SPENQ96T58 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.96■■□□□ 1.11
SPENQ96T58 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SPENQ96T58 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.96■■□□□ 1.11
SPENQ96T58 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SPENQ96T58 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SPENQ96T58 KRT16P3-201ENST00000439127 1283 ntBASIC21.95■■□□□ 1.11
SPENQ96T58 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
SPENQ96T58 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SPENQ96T58 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.95■■□□□ 1.1
SPENQ96T58 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.95■■□□□ 1.1
SPENQ96T58 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPENQ96T58 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.94■■□□□ 1.1
SPENQ96T58 AC110285.6-201ENST00000617652 491 ntBASIC21.94■■□□□ 1.1
SPENQ96T58 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.94■■□□□ 1.1
SPENQ96T58 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPENQ96T58 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.94■■□□□ 1.1
SPENQ96T58 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPENQ96T58 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.94■■□□□ 1.1
SPENQ96T58 AL512631.2-201ENST00000604634 923 ntBASIC21.94■■□□□ 1.1
SPENQ96T58 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SPENQ96T58 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SPENQ96T58 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SPENQ96T58 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPENQ96T58 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SPENQ96T58 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.93■■□□□ 1.1
SPENQ96T58 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SPENQ96T58 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SPENQ96T58 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPENQ96T58 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SPENQ96T58 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPENQ96T58 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SPENQ96T58 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPENQ96T58 AL136116.3-201ENST00000402907 1138 ntBASIC21.92■■□□□ 1.1
SPENQ96T58 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.92■■□□□ 1.1
SPENQ96T58 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SPENQ96T58 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.92■■□□□ 1.1
SPENQ96T58 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPENQ96T58 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.92■■□□□ 1.1
SPENQ96T58 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPENQ96T58 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.92■■□□□ 1.1
SPENQ96T58 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
SPENQ96T58 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPENQ96T58 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPENQ96T58 AC021242.3-201ENST00000607598 1377 ntBASIC21.91■■□□□ 1.1
SPENQ96T58 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPENQ96T58 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPENQ96T58 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.91■■□□□ 1.1
SPENQ96T58 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.91■■□□□ 1.1
SPENQ96T58 LINC01003-201ENST00000564834 1764 ntBASIC21.91■■□□□ 1.1
SPENQ96T58 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SPENQ96T58 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPENQ96T58 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPENQ96T58 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.9■■□□□ 1.1
SPENQ96T58 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPENQ96T58 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms